Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1483 |
Symbol | |
ID | 5166249 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 1730245 |
End bp | 1731855 |
Gene Length | 1611 bp |
Protein Length | 536 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640548983 |
Product | peptidoglycan binding domain-containing protein |
Protein accession | YP_001230255 |
Protein GI | 148263549 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3267] Type II secretory pathway, component ExeA (predicted ATPase) |
TIGRFAM ID | [TIGR03015] putative secretion ATPase, PEP-CTERM locus subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATCTCG AATATTTCGG CTTCAGGGAA AAGCCCTTTT CGGTCACTCC GAACCCACGC TTCATTTTCC TCAGCAAAAA CCACCGGGAA GCTTTTGCCC ACCTTTTGTA CGGCATAAAC AACCATTCCG GTTTTATCGA ACTGACCGGC GAGGTGGGGA CCGGCAAAAC CACGGTTCTG CGCACGTTCC TCAACCGGCT TGACGAGGAT AGCCACCGCA CCGCCCTTAT CTTCAATCCC TGCCTGTCGT CAGAGGAACT GCTGCGCACC ATAAACCGGG AGTTTATAAT ACCCTACGAA GGGCTGAGCC GCGCCGAGCT TCTGGAAAGC CTGAACGTCT TTCTCCTGGA GCAGAAAGCC GCCGGTCGCA ACGTGGTGCT GGTGATCGAC GAGGCGCAGA ACCTGGCGCC GGAGGTGCTG GAACAGATCC GGCTCATCTC CAACCTGGAG ACGGAGACGG ATAAGCTGAT CCAGATTGTG CTGGCAGGAC AGCCGGAACT TGAAGGAATT CTTGAAAAGA CCGAGCTGCG CCAGCTCAGG CAGCGGATTC TGGTGCACTA CCACCTGCTC CCCATGGATT TTGAAGACAC CAAAGGGTAT ATCGAACACC GGCTCGAATT GGCTGGGGGC GGGGTGATCT TTGTAAACCA GGCCCTGAAA AGGATTTTCC GCTATTCCGG CGGAGTTCCC CGGCTTATCA ATATTGCCTG CGACAGGGCG CTGCTGATCG GCTATACAGA GGGAAGCCGC GAGATTCAAG GCCGGATGGC TGCTGCCGCT GTTGCTGAAA TCAAGAGGAC GAGAAGTCCG AAGCATCTTT TTGCCCGGTT ACGTCTCACA GTTCTCGCCA CTTTAGCGAT CCTGCTCATT GTAGGGATAT ATGCTGCCCT GGGGACCAGG CAAACCATAT CCGCCAAGCG TATGCAACCG GCAGTGGCAG CTGTGCCGGA CCCGCTCAAT GCATTGCGTA AAGGGTTTTC CGGGATGGAC GAAGCAGAGA GCGTATCCGC TTCATTCAAA GCCATTGCCC GTCTTTGGAA TGTTTCGCCG GTAGCAAACC TGCAGAAGGT GAGCAGCATC CAGGACCTGG AAAAACTGGC GCTGCAGCGG GGGCTCCGCC TTACACCGTT CACCGGCAGT CTCGACCTTC TCTTGCGCAG TGATTCGCCC GCACTTCTTG AGTTCACCAT TCCGGGTGTC AGCGGCAAGC GATATCTGGC CCTGGTCGGC AAGGACAATG ACCAGTTGCT GATTTCTCCT CCCCTGGCCG GCCATGATTC GCTCAGCAGC GAGGAACTCA AAGCGCTTTG GTCGGGACGC AGTTACCTGT TTTGGAAAAA TATATACAAT ATTCGTCCAA CCATCTCGGC AGGGAGTAGC GGCTGGCGGG TGAGCCGCCT GCAACAGCTC CTTGCCGGTG CAGGGTTTTA CAAAATCCGG CTTAACGGGG TTTTTGACGC TGCCACCCAA AATGCGCTCA AGCAATACCG GCTGGCACGG GGAATTGAAC AGAGCGACAG GGTTGGAGAG TTGACCCTTC TTTTTCTGTA TAAGGAAGGA AAAGATCATA TCACCCCGAA GCTTGAAAAG AGGGGGGGCA ACAGGCTATG A
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Protein sequence | MYLEYFGFRE KPFSVTPNPR FIFLSKNHRE AFAHLLYGIN NHSGFIELTG EVGTGKTTVL RTFLNRLDED SHRTALIFNP CLSSEELLRT INREFIIPYE GLSRAELLES LNVFLLEQKA AGRNVVLVID EAQNLAPEVL EQIRLISNLE TETDKLIQIV LAGQPELEGI LEKTELRQLR QRILVHYHLL PMDFEDTKGY IEHRLELAGG GVIFVNQALK RIFRYSGGVP RLINIACDRA LLIGYTEGSR EIQGRMAAAA VAEIKRTRSP KHLFARLRLT VLATLAILLI VGIYAALGTR QTISAKRMQP AVAAVPDPLN ALRKGFSGMD EAESVSASFK AIARLWNVSP VANLQKVSSI QDLEKLALQR GLRLTPFTGS LDLLLRSDSP ALLEFTIPGV SGKRYLALVG KDNDQLLISP PLAGHDSLSS EELKALWSGR SYLFWKNIYN IRPTISAGSS GWRVSRLQQL LAGAGFYKIR LNGVFDAATQ NALKQYRLAR GIEQSDRVGE LTLLFLYKEG KDHITPKLEK RGGNRL
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