| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_1152 |
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| Symbol | |
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| ID | 5164815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter uraniireducens Rf4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009483 |
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| Strand | + |
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| Start bp | 1351156 |
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| End bp | 1352622 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640548656 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_001229929 |
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| Protein GI | 148263223 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0888361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGCGGC TAAGTCCAAG AATCATTGCT ACCGTTCCTG CAACGCTCGA CACGCCATCT
TCAAAAATCG AGATGGTAAT TACCGACCTC GGCCTGAACG GCGCTTATCT CAGGGCGCAC
TCTCCCTTCC CCGGCAAGAA ACTGGGCGTG GATACCCCGG TTTTGCTGCA ATATAACCTC
TTCGGGAAAG GACTTTTTGA GCATCGTGGA AATATAATAA GGAAGGATAA CGCCGGTTAT
GCCGTGAATT TTCCCGGGCT CGATTTTGCC ACAAAACGCA AGCTTTGGGA GTTTATCGTC
GACAATCTGT CCGATGTGCA CGAGTGCCCA TTTTGCGGCG AGAGTTACAT CACGATGCCG
ACCACATGCA AAAGATGCGG CTGGGAACTC AATTTCAACC CTCCGGAGTA TTTCAACTAC
TATGAAAAGA ACTGCACGAT CAAGAAATTG CATGAAAGAC TGTCCGGCCT GGATATAGAG
CAGTTACAGA AAATCGTCAA TTTTATCGAC ATCGATATTG CAAAGGTTAT GGGGAGTGAG
GAAATTCAGG AATTTGTCGG CACAGGCAAC GCCATGCTGG AAGTGTTCGC CAATATCAGG
AAGGTGGCTC CTACCGACCT CACCGTCTTG GTCCTGGGAG AAAGCGGCAC CGGCAAGGAA
CTGACAGCCC AGGCAATTCA CGATCGGAGT ACTCGCAAGG ACAAACCCTT CGTAGCGATA
AACTGTGCTG CAATTCCGGA CAATCTCCTC GAAGCGGAAC TTTTCGGCTA TGAAAAGGGG
GCGTTTACCG GGGCGCACAT CAGCAAAAAG GGGAAATTTG AATTTGCGGA CAACGGGACC
ATTTTCCTGG ATGAGATCGG CGATATGCCT CCCAATCTCC AGGCGAAACT GTTGCGGTTT
CTCCAGGACA AGATTGTGGA GAGGATCGGC ACCGTCGGCG GGAAGAAGGT CAATGTGCGG
CTTATTGCCG CCACCAACCG TGATCTTGAT GCCGCGATTG CCGAGGGGAA GTTCCGAAGT
GACCTTTATT ACAGGTTGGA TGAGTTTACC ATTAATCTTC CCCCGGTCCG GGAACGGGGG
GAAGATACGG TAATCCTTGC CAAGTACTTC CTGAACAAGT TTTCCAGGGA AGTCGGCTTG
ACGAAGACCT TTACCAAAGA TGCTGCCGAC GCTATCCGCA ATTACGACTG GCCGGGGAAT
GTCAGGGAGA TAATCAACAA GGTGAGAAGG GCGATAGTTA TGGCCGGCGG CAAAACCGTC
ACTCCCGTGG ATTTGCTTCT GGACGTGGCA AAGATGGATG TTGGAGCGGA AAATAATCAG
CTGAGCGATG CGTTGGCCCA AATTGAAAGG GCGAAGATCA AAGAAGTTCT CAAAGGCTGC
AGCCATAACC TTTCCAATGC TGCCAGGATG CTGGGGATAA GCCGTCCCAC CCTGTACCGT
CGCATGAAGA TTTATGGCAT CGATTAG
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| Protein sequence | MPRLSPRIIA TVPATLDTPS SKIEMVITDL GLNGAYLRAH SPFPGKKLGV DTPVLLQYNL
FGKGLFEHRG NIIRKDNAGY AVNFPGLDFA TKRKLWEFIV DNLSDVHECP FCGESYITMP
TTCKRCGWEL NFNPPEYFNY YEKNCTIKKL HERLSGLDIE QLQKIVNFID IDIAKVMGSE
EIQEFVGTGN AMLEVFANIR KVAPTDLTVL VLGESGTGKE LTAQAIHDRS TRKDKPFVAI
NCAAIPDNLL EAELFGYEKG AFTGAHISKK GKFEFADNGT IFLDEIGDMP PNLQAKLLRF
LQDKIVERIG TVGGKKVNVR LIAATNRDLD AAIAEGKFRS DLYYRLDEFT INLPPVRERG
EDTVILAKYF LNKFSREVGL TKTFTKDAAD AIRNYDWPGN VREIINKVRR AIVMAGGKTV
TPVDLLLDVA KMDVGAENNQ LSDALAQIER AKIKEVLKGC SHNLSNAARM LGISRPTLYR
RMKIYGID
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