Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1083 |
Symbol | rpsE |
ID | 5165638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 1280904 |
End bp | 1281392 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640548584 |
Product | 30S ribosomal protein S5 |
Protein accession | YP_001229862 |
Protein GI | 148263156 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0098] Ribosomal protein S5 |
TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.237908 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCTTAAGA TCAATCCCAA TGACATTAAT CTTACGGACA GGGTAGTTCA TATCAGCCGT GTTGCAAAGG TTGTGAAAGG TGGCCGTCGT TTTAGTTTTT CAGCGCTCGT AGTGGTGGGC GATGGAAATG GCTATGTCGG TTATGGCCTC GGCAAGGCTA ATGAAGTCCC TGAAGCGATT CGAAAAGGTG TTGAACAGGC GAAGAAGAAT CTTATCAAGG TGCCGATTGT TGAAGGGCAA ACTATTCCTT TCGAGATCGA AGGACGATTC GGCGCTGGAA AAGTATTGAT GATGCCTGCC TCTGCTGGTA CTGGTGTGAT AGCCGGTGGT GCAGCGAGGG CTGTATTTGA ATCGGCTGGT GTTCATAATA TACTTGCTAA ATGCCTTGGA TCCAATAACC CGCATAACGT TGTGAAAGCC GCTTTTGCCG GTCTTATGAG ACTAAAGACC CCTGAAGAGC TAAGTGCTAG AAGAGGTCTG GCTGAGTAA
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Protein sequence | MLKINPNDIN LTDRVVHISR VAKVVKGGRR FSFSALVVVG DGNGYVGYGL GKANEVPEAI RKGVEQAKKN LIKVPIVEGQ TIPFEIEGRF GAGKVLMMPA SAGTGVIAGG AARAVFESAG VHNILAKCLG SNNPHNVVKA AFAGLMRLKT PEELSARRGL AE
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