| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0888 |
|---|
| Symbol | |
|---|
| ID | 5163102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 1052589 |
|---|
| End bp | 1054112 |
|---|
| Gene Length | 1524 bp |
|---|
| Protein Length | 507 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640548384 |
|---|
| Product | NADH-ubiquinone oxidoreductase, chain 49kDa |
|---|
| Protein accession | YP_001229667 |
|---|
| Protein GI | 148262961 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3261] Ni,Fe-hydrogenase III large subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATA ATTTCTCCAT GAAGACATTC TATAACGGCG AGGCTCTCCC GCTGGCAGCG
GTGCCGACGG TCAAACTGGA GGATTTTCTC CAGGGAATCA TCAATGCCGC GGACCGCGGC
TGGCGGATCT CCGCCCTGTT CGGCGAAGAG AACGGGCCGG GCGTGACCCT CTATGCCGTG
CTCTCGGCCA AGGCCGACGG GGTGATGGGA ATCATGCGCA CCCAGTGCGG CGAATCCTTT
CCCTCCATCA CCCCCTACTG CCCCCAGGCA AACCTCTTTG AACGGGAGAT AGCCGAACAG
TTCGGAATCG TCCCGGAAGG GCACCCCTGG TTCAAGCCGG TCCGCTTCCA CCGCTCGTTC
CACCCCGCCC GCGACGCCTG GGGACGGGAT GCAGCAGTGC AGATCCTGCC GGGTGTCACC
GACTTTTACC GGGTGGAGGG TGAAGAGGTC CATGAAGTGG CGGTCGGACC TGTCCACGCC
GGGGTCATCG AACCGGGGCA CTTCCGCTTC CAATGCCACG GCGAAGAGGT CTTTCACCTG
GAGATAGCCT TGGGCTTCCA GCACCGGGGG ATCGAAGCGG GACTGATCGG CGGCCCGCAG
ACTAAAACAG TCTACCAGAT GGAGACCGGC GCAGGGGACA GCACCGTAGC CCACACCTGG
GCCTACTGCC TGATCCTCGA AGCCCTGGCC GGCCGCCGCA TACCCGCCAA AGGCGGGGTA
ATCCGCGGCA TCGCACTGGA ACTGGAGCGG CTCGCCAACC ACACCGGCGA TCTGGGCGCC
ATTGCCGGCG ACACCGGCTA TCTCCCCACA TCCTCCTTCT GCGGCCGGAT CAGGGGGGAT
TTTCTCAATA TGAGCGCCGT CCTCTGCGGC AGCCGCTTCA GCCGCGGACT GCTCCGCCCC
GGTGGAAGCG GCTTCGATTG CAGCCAGAAG CAGGCGGACG ACCTCTTGCA GCGCCTGGCA
GCTGCCCGGG CCGACCTCTT CAACGCCGTA GACCTCATGT GGACCACGCC GTCGGTATTG
GCAAGGCTGG AAAACACCGG CACCGTTTCC GTCGGCACCG CCAGGGAGCT CGCCCTGACC
GGTCCTCCTG CACGTGCCTG CGGCATGGCC ATGGATGTGC GCCAGGACTT CCCCTACGGC
ATCTACCAGA TGAGCCAGAT ACCGGTGGTC ACCGCCAAGA GCGGCGACGT CTACGCCCGC
ACCCTGGTCA GGTGGCTGGA GGCGGAGAAA TCCCTGGATT TTCTCGAAGA GCAGCTACGT
CAGCTGCCGA GCGGTCCCTA TCGGAACGGC ATCGCCTCAC CGGCCGGGGA GCACATTGCC
GTGGCCCTGA CCGAAGGGTG GCGGGGCGAG GTCTGCCACG TGGCCATCAC CGACAAGGCA
GGCCATTTCA GCCGCTACAA GATCGTCGAC CCGTCGTTTC ACAACTGGCC CGGCTTGGCC
ATGGCCCTGC GCGGTCAGCA GATTTCCGAC TTCCCGCTCT GCAACAAGAG CTTCAACCTC
TCCTATTGCG GGTTTGATCT GTAG
|
|---|
| Protein sequence | MTDNFSMKTF YNGEALPLAA VPTVKLEDFL QGIINAADRG WRISALFGEE NGPGVTLYAV
LSAKADGVMG IMRTQCGESF PSITPYCPQA NLFEREIAEQ FGIVPEGHPW FKPVRFHRSF
HPARDAWGRD AAVQILPGVT DFYRVEGEEV HEVAVGPVHA GVIEPGHFRF QCHGEEVFHL
EIALGFQHRG IEAGLIGGPQ TKTVYQMETG AGDSTVAHTW AYCLILEALA GRRIPAKGGV
IRGIALELER LANHTGDLGA IAGDTGYLPT SSFCGRIRGD FLNMSAVLCG SRFSRGLLRP
GGSGFDCSQK QADDLLQRLA AARADLFNAV DLMWTTPSVL ARLENTGTVS VGTARELALT
GPPARACGMA MDVRQDFPYG IYQMSQIPVV TAKSGDVYAR TLVRWLEAEK SLDFLEEQLR
QLPSGPYRNG IASPAGEHIA VALTEGWRGE VCHVAITDKA GHFSRYKIVD PSFHNWPGLA
MALRGQQISD FPLCNKSFNL SYCGFDL
|
|---|
| |