| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0872 |
|---|
| Symbol | |
|---|
| ID | 5165868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1034453 |
|---|
| End bp | 1035586 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640548368 |
|---|
| Product | hydrogenase (NiFe) small subunit HydA |
|---|
| Protein accession | YP_001229651 |
|---|
| Protein GI | 148262945 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
|---|
| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAGGA AGAAGGGTGA GACTCGGATA AATTCTAAAG AAGAATACGT GGGGATCTCA
GAAATTCTGG AGCAAAAGGG GATCTCGCGA CGGGACTTCA TGAAATTCTG CACTGCCATG
TCGGCAGCGC TGTCACTTCC CGCCACATTT GCTCCACAGA TTGCCCGGGC CCTTGATGAA
GTGAAGCGGC CGACCTTGGT CTGGCTGGAG TTTCAGGACT GTGCCGGGAA TACCGAAGCA
CTTTTGCGGT CAGCCAATCC GACGGTGGCG GAACTGGTAT TGGACGTCCT TTCCGTTGAT
TACCATGAAA CCATCATGGC TGCTGCCGGA CATCAGGCCG AAGATATCCT GGCGAAGGTG
GTGAAGGAAC AGAAGGGAAA ATATATCGCC GTGGTCGAGG GATCAATTCC ACTCAAGGAC
GGCGGGGTCT ACTGCTGTAT CGGCGGGAGA AGCGCCCTGG ATATAGCCCG TGAAGTGTGC
GGCAATGCCT TTGCCACCAT TGCCGTCGGT TCCTGCGCTG CTTTCGGTGG TATTCCTGCT
GCCGCGCCGA ATCCGACCGG TGCGGTAGGC GTCAAGGATG CGGTTCCGGC AGCTACCGTC
TTGAACCTTC CCGGCTGCCC TCTTAATGCC GACAATCTTA CCGCCACGGT CGTCCATTAC
CTGACGTTCA ACAAGCTCCC GGCAGTCGAC AGTCTGGGCC GCCCCCTGTT TGCATACGGC
AAGAGAATTC ATGATGCCTG TGAGCGCCGG CCCCATTTTG ACGCCGGCCA GTATGTGGAA
GCCTGGGGGG ATGCCGGCCA TCGCAACGGC TTCTGTCTTT ACAAGATGGG GTGCAAGGGA
CCGGCGACCT GGCACAACTG CCCGATCCAG CGATATAACG AAAACACCAG CTGGCCGGTA
GGGGCGGGTC ACGGCTGCGT CGGCTGCTCG GAACCGGTCT TCTGGGACAG CATGACCCCC
TTTTACAAAA GACTGCCCCA TGTGCCCGGC TTCGGCATCG AATACACCGC CGACAAGCTC
GGCGCCGGTC TGTTTGTCGG GGCCGCCGCG GCCTTCTTTG CCCACGGCGT CGTCAAGGCG
TTCCGCCATG AAATTGAGCC GTCTGAGCAG AGCAGGAAAG AGGGGGAAAA ATAA
|
|---|
| Protein sequence | MGRKKGETRI NSKEEYVGIS EILEQKGISR RDFMKFCTAM SAALSLPATF APQIARALDE
VKRPTLVWLE FQDCAGNTEA LLRSANPTVA ELVLDVLSVD YHETIMAAAG HQAEDILAKV
VKEQKGKYIA VVEGSIPLKD GGVYCCIGGR SALDIAREVC GNAFATIAVG SCAAFGGIPA
AAPNPTGAVG VKDAVPAATV LNLPGCPLNA DNLTATVVHY LTFNKLPAVD SLGRPLFAYG
KRIHDACERR PHFDAGQYVE AWGDAGHRNG FCLYKMGCKG PATWHNCPIQ RYNENTSWPV
GAGHGCVGCS EPVFWDSMTP FYKRLPHVPG FGIEYTADKL GAGLFVGAAA AFFAHGVVKA
FRHEIEPSEQ SRKEGEK
|
|---|
| |