| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0870 |
|---|
| Symbol | |
|---|
| ID | 5165463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1030628 |
|---|
| End bp | 1032481 |
|---|
| Gene Length | 1854 bp |
|---|
| Protein Length | 617 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640548366 |
|---|
| Product | phosphoenolpyruvate carboxykinase |
|---|
| Protein accession | YP_001229649 |
|---|
| Protein GI | 148262943 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1274] Phosphoenolpyruvate carboxykinase (GTP) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00431316 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTACG AAGTCAAAAA CGAACAACTG CGGAAATGGG TGGAAGAAGT CTCGGCTTTG
TGTGAACCCG AAAAGATACA CTGGTGCGAC GGTTCGCAGG AGGAATATGA CAACCTGTGC
AGCCTGCTGG TAAAGAGCGG CACATTCCGC AAGCTGAACC AGGAAAAACG CCCCAACAGC
TACCTGGCCT GGTCAGATCC CGGCGACGTG GCTCGTGTTG AAGATCGTAC CTTTATCTGC
AGCTTGTCCA AACAGGATGC GGGTCCGACC AACAACTGGA TGCATCCGAA AGAAATGAAG
GAAACCCTGG GGAAACTGTT CAAGGGTTGC ATGCACGGCA GGACGATGTA TGTCATCCCT
TTCAGCATGG GACCGCTCGG CTCGAATATT GCCAAAATCG GCGTGGAAAT TTCCGATTCG
CCCTATGTCG CAGTCAACAT GCGGATCATG ACGCGGATGG GCAAGGCTGT TCTTGATGTG
CTCGGCGACG GCGAGTTCGT TCCGTGCCTG CATTCGGTGG GAGCGCCGCT GCAACCTGGG
CAAAAAGACG TGCCGTGGCC ATGCAACAAG GAAAAGTACA TCGTCCATTT CCCCGAAGAA
CGCTCAATCT GGTCGTTCGG CAGTGGCTAC GGCGGAAATG CCCTGCTCGG CAAGAAGTGT
CTTGCCCTGC GGATCGCTTC CAAGATTGCC AAGGACGAAG GGTGGCTGGC CGAGCATATG
CTCATCCTGG GGATTGAATC CCCCGAAGGT GAGAAGACCT ATCTGGGCGC CGCATTCCCG
AGCGCCTGCG GTAAAACCAA TCTGGCCATG CTGGTGCCGC CCGACAACTT CAAGAAAAAC
GGCTGGAAAA TCTCCACCGT CGGCGACGAC ATTGCCTGGA TCAAGCCCGG GCCAGACGGG
CAGCTGTATG CCATCAATCC AGAAGCAGGT TTTTTTGGCG TAGCTCCCGG TACTTCGGCC
AAATCCAACC CCAACGCCAT GGCCTCTTGT GCCAGTAACA CCATTTTCAC CAATGTGGCC
TTGACCCCCG ACGGCGATAT CTGGTGGGAA GGAATGACCG ACACCCCCCC AGCCGAATTG
ACCGACTGGC AGGGGAACCC CTGGACTCCA GGCTGCGGCA GGAATGCCGC CCATCCCAAC
TCCCGCTTTA CTTCTCCTGC CAGCCAGTGT CCTTCGATCG ATCCCGAATG GGAGAACCCC
AAGGGGGTTC CGATCAAGGC CTTTGTTTTC GGCGGCCGTC GCAATAATGT CATTCCTCTG
GTGTACCAGT CATTCAACTG GAGCTACGGA GTCTATCTTG CCGCAACCAT GGGGTCGGAG
ACAACGGCCG CTGCCGTCGG CAAGGTCGGC GATGTCCGGC GCGACCCGTT TGCCATGCTG
CCGTTCTGCG GCTATCACAT GGCCGACTAT TTCAACCACT GGTTGCAGAT CGGGCGCACC
AATCCGAATC CGCCACGGAT TTTCAGCGTC AACTGGTTCC GAAAGGATGC CAACGGCAAG
TTCCTCTGGC CAGGTTTTGG CGAGAATATG CGGGTACTGA AATGGATCGT GGACCGGGCC
AACGGACGGG GTTCATCCAT TGAGAGCCCG CTGGGATGGA TGCCGCGCCA TGAAGACCTG
GACTGGAGCG GTTTGGATAG CGTTACCCGC GAGCAGTATT ACGAGCTGAT GTCCGTTGAT
CGGGATGTGT GGAAGGATGA AATCCTCTCC CACGAGGAGT TGTTCGTCAA GATGTACGAC
CGGCTACCCA AGGAGTTTCT GCATATCCGC GAGCTGATTC TTTCCGGCCT GTGGCGTTCG
CCGGAGCATT GGGAGCAGAT CGGTGAGGCA GCTGCCGAAG GATGGAATGA ATAA
|
|---|
| Protein sequence | MAYEVKNEQL RKWVEEVSAL CEPEKIHWCD GSQEEYDNLC SLLVKSGTFR KLNQEKRPNS
YLAWSDPGDV ARVEDRTFIC SLSKQDAGPT NNWMHPKEMK ETLGKLFKGC MHGRTMYVIP
FSMGPLGSNI AKIGVEISDS PYVAVNMRIM TRMGKAVLDV LGDGEFVPCL HSVGAPLQPG
QKDVPWPCNK EKYIVHFPEE RSIWSFGSGY GGNALLGKKC LALRIASKIA KDEGWLAEHM
LILGIESPEG EKTYLGAAFP SACGKTNLAM LVPPDNFKKN GWKISTVGDD IAWIKPGPDG
QLYAINPEAG FFGVAPGTSA KSNPNAMASC ASNTIFTNVA LTPDGDIWWE GMTDTPPAEL
TDWQGNPWTP GCGRNAAHPN SRFTSPASQC PSIDPEWENP KGVPIKAFVF GGRRNNVIPL
VYQSFNWSYG VYLAATMGSE TTAAAVGKVG DVRRDPFAML PFCGYHMADY FNHWLQIGRT
NPNPPRIFSV NWFRKDANGK FLWPGFGENM RVLKWIVDRA NGRGSSIESP LGWMPRHEDL
DWSGLDSVTR EQYYELMSVD RDVWKDEILS HEELFVKMYD RLPKEFLHIR ELILSGLWRS
PEHWEQIGEA AAEGWNE
|
|---|
| |