Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0779 |
Symbol | |
ID | 5166590 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 932031 |
End bp | 933434 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640548277 |
Product | carbohydrate-selective porin OprB |
Protein accession | YP_001229560 |
Protein GI | 148262854 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3659] Carbohydrate-selective porin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000860096 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGCA AGCAGCATGT TGCAGTCTGG TTATCGGTAT TTATCTTTTT ACTGTGTGCC GTATCGTCCG CATTTGCCAT GCACCCGGAG CTTGTCCTGC CGGAAAAAGT CGCATCCGGC CATAAAGCCT GCCAGGAGAT CATGCGTCTT GGCAAGAAGT ATCAGGTCGA GGGGCTGTTC ACCAAGGAGT TTGTCGAGGG TCAATGCCTG CTCAACCGCC TTGACGTTGC GGTGGCGGTG CAGCTGCTGA CGGAAAAGAT GGCCGAAAAG GCCGCCAGGG AAGGTGCCGG GGCGATTGAC AGGGAAGACC TGGCCATTTT GAGCGATCTG AAGGAAGAGC TGCGGGGCGA GATGCTCCTC GCCCAGTCCC GCGCCTTCCA GACCCGTTAC ACCGAACTGG GGACAAACCT CCATGCCATC ACCAGGAACA TCACCATGAG CGGCGGGATG ACCGGCGTGC TGCAGGGCTC CGCGGGCAAT AAGCCGAAAG ATTTCATCGA TGCAGTGGGC AGGGCCGACC TGGTTTTCGA CTTCAAGGTC GGGGAGAACA CCATTGCGGT GATTGACGTG GAAGCCACCG GCGGCTCCGG CATCGATTCC CATATCGGTA ATTATTCCAT CCTCAATAAC GTCCCGCTGG CTCCGACCGA CACGGTACGC TTCCGAACCG CCTGGGTCGA GCACACGGCC ATGAATGACC GGCTCATCTT CACGATCGGC AAGATCGGCT TGACCGACTA TTTTGACAAC AACAGCATTG CCAATAATGA GAACAGCCAG TTCCTGTCCG GTGCTTTCGT CAACTCGCCA GTCCTCGGTG CTCCGTCCTA CGGACCGGGA ATGCGTGTAA ATGCAAGGCT GAGCGACCAG ATTACCTTCG GCATCGGCTA CGGCAGCGGC GACACCACGG CGGCCAACAT CCTTGACCAC GGCTACGGCA TCGTGGAACT GGACTACAAG CAGAAGCTCG GGGAACTGGA GGGAAATTAC CGGCTTTACG GCAGCCTGGA CGGCTCCCTG CCTGGCGGAC TCAAGCTTGT ACAGGAGAAC GCCTTCGGCT TCGGTGTGAG CATCGACCAG CAGATAAGCG AACAGATTAC CCTTTTCGGC CGCTACGGCT GGCATGACGA TGCTGCATAT AAAACAAAAT CCGCCTGGAG CGCCGGATTC CAGTATGCCG GCCCCATTCC GCAACGTAAG GATGACCTTG TCGGTTTCGG CTTCAGCCAG ATCCTGGTCA ACGGCGCTTC CGCCCAGGAG AAACTGATGG AGACATACTA CAGGGTAAAG GTCAGCGACC AGATTGCGGT ATCGCCCCAT TTCCAGTATA TGATCAACCC GCTGGCCGAC AAAGTCGCAG ACAATGTAGT TGTCATGGGA TTGAGGACGC AAGTCATATT CTGA
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Protein sequence | MKGKQHVAVW LSVFIFLLCA VSSAFAMHPE LVLPEKVASG HKACQEIMRL GKKYQVEGLF TKEFVEGQCL LNRLDVAVAV QLLTEKMAEK AAREGAGAID REDLAILSDL KEELRGEMLL AQSRAFQTRY TELGTNLHAI TRNITMSGGM TGVLQGSAGN KPKDFIDAVG RADLVFDFKV GENTIAVIDV EATGGSGIDS HIGNYSILNN VPLAPTDTVR FRTAWVEHTA MNDRLIFTIG KIGLTDYFDN NSIANNENSQ FLSGAFVNSP VLGAPSYGPG MRVNARLSDQ ITFGIGYGSG DTTAANILDH GYGIVELDYK QKLGELEGNY RLYGSLDGSL PGGLKLVQEN AFGFGVSIDQ QISEQITLFG RYGWHDDAAY KTKSAWSAGF QYAGPIPQRK DDLVGFGFSQ ILVNGASAQE KLMETYYRVK VSDQIAVSPH FQYMINPLAD KVADNVVVMG LRTQVIF
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