| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0499 |
|---|
| Symbol | |
|---|
| ID | 5162868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 576692 |
|---|
| End bp | 580831 |
|---|
| Gene Length | 4140 bp |
|---|
| Protein Length | 1379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640548002 |
|---|
| Product | cytochrome C family protein |
|---|
| Protein accession | YP_001229287 |
|---|
| Protein GI | 148262581 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR01904] Geobacter sulfurreducens CxxxxCH...CXXCH domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00294186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAT TTTACAGCGC AGGATATTTC AGAAAACCGG CTTTATTCTT GCTGTTGTCC
TTGATGACTA TATTCGTCTT TGCAGCTTCG GCGTTTGCGT TAACCGGCAA CAAGATTGAT
CAGTGTTATG ATTGTCACGG CAGTCCGGGC GATAACCGGC CATTGGACGC CGTATACAGG
GATATGACAA GTGGCGCGTT CCCCGGTAAC CATCGGACGC ATATGGCTTC GACGGCTACT
GCTTCATCGT GTGTCCCCTG TCATAACAAC AGTGGATTTA CGATCGACCA CCGTAACGGA
AAGATCCAGT TCGCGGCGAA TGTCAACACA TCGCCTGCAA CCGGTAAGTA CATGAAGTAC
GGCTTCCAGG CTTTCACCTC CAGTCAGGTT TCCAGCCCTA CCCTCGGCAC ATGTGCCACC
GTCAACTGTC ACTTCGAATC TATTACCCCC ACATGGGGTT CGTCAGCGGC TTCGACAAAC
TGTGATACCT GCCATGCGGC ACAGCCGTCT ACCCTGAGCC ATCCAAAGCA CGTGACCGCT
TTTGGCGGAA CAGCTTCCTG TATAAAATGC CATCCGAATC GGACCACCTT CGAGCATGCG
ACCAGCGCCG GTAATGCCGG CCGCAATATA GCCGTGACGA TCGGCAGCTA TGCCGGCTCC
AACTATAATT ACCTCCCCAG TCAGTCGGCC ACCCGGACAG CCGGTAGCTG TTCCGCCCTT
TATTGCCACA GCTCCGGTCA GTCGGCAACC GGTGGAGCAC TTACCGGTGG TGATTATGTG
ACCGCAACCT GGGATAGTGC TGCGAGCGGC GCCTGCGGCA CCTGTCATAA AAACACTGCG
GCGACCATCG CCAGCGGCAG CCACAACAAA CACCTTAATG CAGCCGGTTC GGCCGGATGC
GTAGACTGTC ACGTCGGCGT AACAGGCGAC GGCGTATCCT ACAACTCGAC CCGTCACGTC
GATACCTTCA TCAACGTCAC CGGCGCATAC AGCCAGGGCA AGGCAAGCAC CCCCGGCAAC
GGCTACGGCA CCTGTTCGGC CGCCGCCTGT CACGACAACG GTACCGGCAC CAAAGTGATA
ACCCCGACCT GGGGCAACAC GGCAGCCGCC TGTACAGCCT GTCATGCATT GCAGCCCGCA
ACCGGCAGCC ACACCAAACA TCTCAGCACC ACACAGTACA CCAAGGCAAA TTGCGCCTCC
TGTCATGCCA GCGCAGTGGA AGGCTCCAAT GGCGGCACAG GGCACCTTGA CGGAAACATA
GACGCAATCA ATGGCTATCC CGCCAACAAG ACCAAGGGGA GCGCCTACGC AACATGTAAT
GCCGCATACT GCCACAGCCC CGGCCAGTCG GTCACCGGCG GCGCCCTGAC GACCGAGTAT
GCCACCATCA CCTGGGGCGG CACCGCAGCC TGCGGCAGCT GTCACAACGC CACCAAGGCG
ACCATCGCCA GCGGCAGCCA CAACAAACAC CTTAATGCAG CCGGTTCGGC CGGATGCGTA
GACTGTCACG TCGGCGTAAC AGGCGACGGC GTATCCTACA ACTCGACCCG TCACGTCGAT
ACCTTCATCA ACGTCACCGG CGCATACAGC CAGGGCAAGG CAAGCACCCC CGGCAACGGC
TACGGCACCT GTTCGGCCGC CGCCTGTCAT GACAACGGTA CCGGCACCAA AGTGATAACC
CCGACCTGGG GCAACACGGC AGCCGCCTGT ACAGCCTGTC ATGCATTGCA GCCCGCAACC
GGCAGCCACA CCAAACATCT CAGCACCACA CAGTACACCA AGGCAAATTG CGCCTCCTGT
CATGCCAGCG CAGTGGAAGG CTCCAATGGC GGCACAGGGC ACCTTGACGG AAACATAGAC
GCAACCAACG GCTATCCCGC AAACAAGACC AAGGGGAGCG CCTATGCAAC ATGTAATGCC
GCATACTGCC ACAGCCCCGG CCAGTCGGTC ACCGGCGGCG CCCTGACGAC CGAGTATGCC
ACCATCACCT GGGGCGGCAC CGCAGCCTGC GGCAGCTGTC ACAATGCCAC CAAGGCGACC
ATCGCCAGCG GCAGCCACAA CAAACACCTT AATGCAGCCG GTTCGGCCGG ATGCGTAGAC
TGTCACGTCG GCGTAACAGG CGACGGCGTA TCCTACAACT CGACCCGTCA CGTCGATACC
TTCATCAACG TCACCGGCGC ATACAGCCAG GGCAAGGCAA GCACCCCCGG CAACGGCTAC
GGCACCTGTT CGGCCGCCGC CTGTCACGAC AACGGTACCG GCACCAAAGT GATAACCCCG
ACCTGGGGCA ACACGGCAGC CGCCTGTACA GCCTGTCATG CATTGCAGCC CGCAACCGGC
AGCCACACCA AACATCTCAG CACCACACAG TACACCAAGG CAAATTGCGC CTCCTGTCAT
GCCAGCGCAG TGGAAGGCTC CAATGGCGGC ACAGGGCACC TTGACGGAAA CATAGACGCA
ATCAATGGCT ATCCCGCCAA CAAGACCAAG GGGAGCGCCT ACGCAACATG TAATGCCGCA
TACTGCCACA GCCCCGGCCA GTCGGTCACC GGCGGCGCCC TGACGACCGA GTATGCCACC
ATCACCTGGG GCGGCACCGC AGCCTGCGGC AGCTGTCACA ACGCCACCAA GGCGACCATC
GCCAGCGGCA GCCACAACAA ACACCTTAAC GCAGCCGGTT CGGCCGGTTG CGTAGACTGT
CACGTCGGCG TAACAGGCGA TGGCGTATCT TACAACTCGA CCCGTCACGT CGATACCTTC
ATCAACGTCA CCGGCGCATA CAGCCAGGGC AAGGCAAGCA CCCCCGGCAA CGGCTACGGC
ACCTGTTCGG CCGCCGCCTG TCATGACAAC GGTACCGGCA CCAAGGCGGT AACCCCGACC
TGGGGCGACA CGGCAGCCGC CTGTACCGCC TGTCATATAC TTCAGCCCGC AACCGGCAGT
CACACCAAGC ACCTCACGGG TCTTGCGGGT AAATTCTTTG CAAACGCTGT CTGCGCTGAT
TGCCATAACG GCGCAGTCCA GGGTACATCA GTCAACGCAA ACCATCTTGA TAGCAACATC
GATGTCTACA AGACAACAGC CGGCGACCTC GGCTATTCCG CAAATAAGCT CAAGGGGAGC
CCCTACGCAT CCTGTACCAC AACCTACTGC CATTCAAACG GTAGGGGGGG GTATCAGTCG
CAACTCTGGG GTGCTACCAA TCTCAACTGT TCATCATGTC ACCCGAATCT TACCGGCGCC
CATGGCAAGC ATGTGAAGGA CCTTCTCACT ACAGTGACCT TCTACGCCTA TACGTCAAAC
AAATCGGCAG GCGACGACAC ATTGGCCGGA TGGGGATATA AGTTCGGTTG CGCCAACTGC
CATCCTACGG CTGCTACAAG TCATCTGAAC GGTTCCATTG ATGTCCAGGT TAATAACGTA
GCCGGTGTAG GCACACTGAG ATCCAAGAAC CCAGTGGGTG CTGCGGTGAA TGTGGTTGTC
ACAGGATCGA ATGTTACCTG TACGGCAGTT TATTGCCATA GCGACGGTAA GGCCACCCCA
ACCGGCACCA GTCCTAACTG GTATGCGACC TTCCCGGCCG GCAGTGACCG TTGCGCACAA
TGCCATGGCA ACTCGCCGAC AACCGGTGCC CATCAGGCCC ATGTGGTTGG CATCCACCAG
GATAACATCT TCAATGGCGC AAGCGGCAAA CTGCTAGCTG GTACTACCAA CTCAAGCCAT
GGCGATGCCA CCCAGTCCAC CACCATAAAC TGTAATATCT GTCATAGCCT GACCGTCACA
TCGGCCCGCA ATGATGAGAA CCTGGCCTGT ATCGGTTGTC ACTCTGCAAA GACAAACAAG
GCATCCATCG CTTATCTGGG TAACCATGTC AATGGCCAGG TCAATTTCAG CTTCGCAGCG
GTAGCTGTAA AATCCAGGGC ACAGGTCAGA GATGGCAGCT TCGACAGCTA CTCAGGTGCA
TGGGGACGGA ATGCCAATTC TTATAAGGCT GGCGCCACAC CGTATGACGC CGCGAAGAAA
GCCCTTGACA ATACCATGTG GAGTGCTGGA AACTGCTCGA ACATAGCTTG CCACAACGGC
AAGACGGTTA ACTGGAACGA TACGACGGTT ACTTGTGAAA GCTGTCACAC CGGCCTGTAA
|
|---|
| Protein sequence | MKTFYSAGYF RKPALFLLLS LMTIFVFAAS AFALTGNKID QCYDCHGSPG DNRPLDAVYR
DMTSGAFPGN HRTHMASTAT ASSCVPCHNN SGFTIDHRNG KIQFAANVNT SPATGKYMKY
GFQAFTSSQV SSPTLGTCAT VNCHFESITP TWGSSAASTN CDTCHAAQPS TLSHPKHVTA
FGGTASCIKC HPNRTTFEHA TSAGNAGRNI AVTIGSYAGS NYNYLPSQSA TRTAGSCSAL
YCHSSGQSAT GGALTGGDYV TATWDSAASG ACGTCHKNTA ATIASGSHNK HLNAAGSAGC
VDCHVGVTGD GVSYNSTRHV DTFINVTGAY SQGKASTPGN GYGTCSAAAC HDNGTGTKVI
TPTWGNTAAA CTACHALQPA TGSHTKHLST TQYTKANCAS CHASAVEGSN GGTGHLDGNI
DAINGYPANK TKGSAYATCN AAYCHSPGQS VTGGALTTEY ATITWGGTAA CGSCHNATKA
TIASGSHNKH LNAAGSAGCV DCHVGVTGDG VSYNSTRHVD TFINVTGAYS QGKASTPGNG
YGTCSAAACH DNGTGTKVIT PTWGNTAAAC TACHALQPAT GSHTKHLSTT QYTKANCASC
HASAVEGSNG GTGHLDGNID ATNGYPANKT KGSAYATCNA AYCHSPGQSV TGGALTTEYA
TITWGGTAAC GSCHNATKAT IASGSHNKHL NAAGSAGCVD CHVGVTGDGV SYNSTRHVDT
FINVTGAYSQ GKASTPGNGY GTCSAAACHD NGTGTKVITP TWGNTAAACT ACHALQPATG
SHTKHLSTTQ YTKANCASCH ASAVEGSNGG TGHLDGNIDA INGYPANKTK GSAYATCNAA
YCHSPGQSVT GGALTTEYAT ITWGGTAACG SCHNATKATI ASGSHNKHLN AAGSAGCVDC
HVGVTGDGVS YNSTRHVDTF INVTGAYSQG KASTPGNGYG TCSAAACHDN GTGTKAVTPT
WGDTAAACTA CHILQPATGS HTKHLTGLAG KFFANAVCAD CHNGAVQGTS VNANHLDSNI
DVYKTTAGDL GYSANKLKGS PYASCTTTYC HSNGRGGYQS QLWGATNLNC SSCHPNLTGA
HGKHVKDLLT TVTFYAYTSN KSAGDDTLAG WGYKFGCANC HPTAATSHLN GSIDVQVNNV
AGVGTLRSKN PVGAAVNVVV TGSNVTCTAV YCHSDGKATP TGTSPNWYAT FPAGSDRCAQ
CHGNSPTTGA HQAHVVGIHQ DNIFNGASGK LLAGTTNSSH GDATQSTTIN CNICHSLTVT
SARNDENLAC IGCHSAKTNK ASIAYLGNHV NGQVNFSFAA VAVKSRAQVR DGSFDSYSGA
WGRNANSYKA GATPYDAAKK ALDNTMWSAG NCSNIACHNG KTVNWNDTTV TCESCHTGL
|
|---|
| |