| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0492 |
|---|
| Symbol | |
|---|
| ID | 5163885 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 561079 |
|---|
| End bp | 562017 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 640547995 |
|---|
| Product | transketolase, central region |
|---|
| Protein accession | YP_001229280 |
|---|
| Protein GI | 148262574 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3958] Transketolase, C-terminal subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACAA TGATTGCTAC CAGAGACGCC TATGGTGAAA CCCTTGCGGA ACTGGGCGCG
GAGAATAAGA ACGTTGTTGC CCTGGACGCG GACCTTTCGG GTTCGACGAA AACCGGCGTT
TTTGCAAAAA AATTCCCTGA GCGGTTTTTC AATATGGGCA TTGCCGAGGC AAATATGGTC
GGCACTGCTG CCGGGCTCGC CGCTGTCGGG AAGATACCGT TTCTTTCCAC ATTCGCTATT
TTTGCCGCCG GCCGGGCTTG GGAGCAGATC CGTCAGTCAG CCGCATATCC GAAGGCCAAT
GTCAAGATAG TAGCGACCCA CGGTGGCGTA ACGGTCGGCG AAGACGGTGG TTCCCACCAG
TCGGTGGAAG ATATAGCCAT CATGCGTGCG ATTCCCAACA TTACGGTCAT TGTTCCGGCC
GACGGCGTTG AAACCAAGGG CGCCATCAGG GCCGCCGCCG CCATGAAAGG GCCGGTCTAT
GTCAGGCTCG GACGCAACAA GGTGCCGACC ATCTTCCCTG AAGACCACCG TTTTGAAATC
GGCAAAGGGG CTGAGTTGGT TGCCGGTTCC CATATGACCT TCGTTACCAC CGGCCTTATG
ACTGCCCAGG CAATCGCCGC CGCAGAGAGT TTGAAGAAGG ATGGCATTTC TGCGCGGGTG
GTCCATATCG GCACCATCAA GCCGCTTGAC CAGGAAATAA TCCTCAAGGC AGCCCGGGAA
ACCGGCGCCA TTGTCACTGC AGAAGAGCAC TCCGTCATCG GCGGGCTTGG CGGCGCCGTT
GCCGAGCTTC TTGGCGAAAA CTGTCCGACC CCCATGAAAC GGATCGGCAT CAACGACCGC
TTCGGCACCT CCGGCAAGGC GGAAGAACTG CTCAAATATT TCGGCCTGAC CCCGGACTGT
CTGGTTGACG CAGCAAAGGA AATCCTTTCG AGGAAATAG
|
|---|
| Protein sequence | MSTMIATRDA YGETLAELGA ENKNVVALDA DLSGSTKTGV FAKKFPERFF NMGIAEANMV
GTAAGLAAVG KIPFLSTFAI FAAGRAWEQI RQSAAYPKAN VKIVATHGGV TVGEDGGSHQ
SVEDIAIMRA IPNITVIVPA DGVETKGAIR AAAAMKGPVY VRLGRNKVPT IFPEDHRFEI
GKGAELVAGS HMTFVTTGLM TAQAIAAAES LKKDGISARV VHIGTIKPLD QEIILKAARE
TGAIVTAEEH SVIGGLGGAV AELLGENCPT PMKRIGINDR FGTSGKAEEL LKYFGLTPDC
LVDAAKEILS RK
|
|---|
| |