Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0238 |
Symbol | |
ID | 5163689 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 302239 |
End bp | 303471 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640547737 |
Product | L,L-diaminopimelate aminotransferase |
Protein accession | YP_001229027 |
Protein GI | 148262321 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACTGA TTAACGACAA CTACCTGAAA CTGAAGGCGG GCTACCTCTT CCCGGAGATC GGCCGCCGCG TGCGCGCCTT TGCAGAGGCG AACCCCTCTG CCAAGGTGAT CCGCCTGGGG ATCGGCGACG TGACGAGACC GCTTGCCCCA GCCGTCCTCA AGGCGTTCCA CGCCGCTGTC GACGATCTCG GCACTACTGA CAACTTTGCC GGCTACGGCC CGGAGCAGGG GTACGACTGG CTGATCAACG CCATCATCGA GAAGTCCTAC AAGCCGCTCG GCGTTTCCCT GAAGACGGAC GAGATGTTCA TCTCCGACGG CTCCAAGTGC GACTGCGCCA ACATCCTCGA CATCTTCGCC CTCGACAACG TGGTGGCCAT CGGCGACCCG GTCTACCCGG TCTACAACGA CACCAACGTC ATGATCGGCC GCACCGGCGA GGCGGACGAC AAGGGGTATT ACAAAGGCAT CGTCTACATG CCGTGCAACG AGGAGAACCA CTTCATCCCC TCTCTCCCCA CGGAGAAGGT GGACATCATC TACCTCTGCT TCCCCAACAA CCCGACCGGC ACCGTCGCCT CCAGGGCCGA GCTGAAGAAG TGGGTCGACT ACGCCAACGC CAACGACGCG GTCATCTTTT TCGACGCAGC CTACGAGGCG TTCATCACCG ATCCCGAAAT CCCCCACTCC ATCTACGAGA TCGAAGGTGC CAAGAAGTGC GCCATCGAGT TCCGCTCCTT CTCCAAGACC GCCGGCTTTA CGGGCGTGCG CTGCGGCCTC GTGGTCGTTC CGGAAGAGGT GATGGGGACG ACATCAACAG GCGAGCGGTA CAGCTTCAAC AAGCTCTGGC TGCGCCGCAC CACCACCAAG TTCAACGGCG CCTCCTACCC GGTACAGCGG GCCGCAGAAG CAGTCTACTC CGACGAGGGG TGGAAGCAGA CGAAAGAGAT CATCGACTAT TACATGGAGA ACGCCCGGAT CATCCGCGAA GGGATGAAGG AAGCCGGTCT GACTGTCTAT GGCGGCGTCA ATGCCCCCTA CATCTGGCTG AAGACCCCGG CCGGCATGAC CAGCTGGGAT TTCTTCGACA AGCTCCTCAC CGAGTGCAAC GTGGTCGGTA CCCCTGGCTC CGGCTTCGGT CCCAGCGGGG AAGGGTACTT TAGATTGTCG GCCTTCGGCC ATCGAGAGAA TGTGATTGAG GCGGTGGAGA GGATCAAGAA GAATTTGAAG TAG
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Protein sequence | MALINDNYLK LKAGYLFPEI GRRVRAFAEA NPSAKVIRLG IGDVTRPLAP AVLKAFHAAV DDLGTTDNFA GYGPEQGYDW LINAIIEKSY KPLGVSLKTD EMFISDGSKC DCANILDIFA LDNVVAIGDP VYPVYNDTNV MIGRTGEADD KGYYKGIVYM PCNEENHFIP SLPTEKVDII YLCFPNNPTG TVASRAELKK WVDYANANDA VIFFDAAYEA FITDPEIPHS IYEIEGAKKC AIEFRSFSKT AGFTGVRCGL VVVPEEVMGT TSTGERYSFN KLWLRRTTTK FNGASYPVQR AAEAVYSDEG WKQTKEIIDY YMENARIIRE GMKEAGLTVY GGVNAPYIWL KTPAGMTSWD FFDKLLTECN VVGTPGSGFG PSGEGYFRLS AFGHRENVIE AVERIKKNLK
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