| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_4898 |
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| Symbol | |
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| ID | 8756600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 5110886 |
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| End bp | 5112646 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003411800 |
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| Protein GI | 284993245 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGAAGG GGCCTGTCGT CGAGCGAGGA GAGGGAGGAG CGCCGGTACC GGCGCGCACC
ATCCTGACCA CTCCACCTGC ACACGCGAGC ACGTCCGGGG CCGCGCAGGC CCACCCCGCC
GTCGCCCCAC CGCCGCCGTC GCCGGCCGAC CGGGGCGGCT CCCTGGACCG GGTCGTCTTC
GGGGTCGCCG CCGTCGTCGC CCTGGCCTTC GTCGCCTGGG GCTTCGCCAG CCCGCAGGGC
CTGGGCTCGG TCAGCGGCAC CGCACTGGAG TGGGTGGAGA CCAACCTCGG CTGGCTGTTC
GTGCTGCTGG CCTCCGCCTT CGTCGTCTAC GTGATCTGGC TCGCGGCGGG GAAGTACGGC
CGCATCCCGC TCGGCCGGGA CGACGAGGCG CCGGAGTTCC GCACGGTGTC CTGGGTGGCG
ATGATGTTCA GCGCCGGCAT GGGCATCGGG CTGATGTTCT TCGGCGTCAG CGAGCCGCTG
TCGCACTACG TCTCCCCGCC GCCGGGCACC GTGGCCGCCG AGACGCCCGA GGCCCTGCAG
ACGGCGCTGG CGACCACGCT GTTCCACTGG TCGCTGCACC CGTGGGCGAT CTACGCCGTC
GTCGGCCTGG CCATCGCCTA CGGCACCTTC CGGCGCGGCC GGCGTCAGCT GTTCAGCGCC
GCGTTCGCCC CGCTGTTCGG CCGGCAGCGC ACCGAGGGGC CGGCCGGCAA GGTCATCGAC
GTCCTGGCGA TCTTCGCCAC GCTGTTCGGC TCGGCGGCGT CGCTGGGGCT GGGGGCGCTG
CAGATCGGCA GCGGCATGGA GATCCTGGGC TGGGCCGGGG ACCTCGGCAA CGGGCTGTTC
GTGCTCATCA TCGCGGTGCT CACCGCGGCC TTCGTCGCCT CGGCGGTGTC GGGCATCGCC
AAGGGCATCC AGTGGCTGGC CAACACCAAC ATGGTGCTGG CCGTCGTCCT GGCCGTGTTC
GTCTTCGTCG TCGGCCCGAC AATCTTCATC CTCAACCTGC TGCCGGCCGC CATCGGCAAC
TACTTCGCGG ACCTGGGCGA GATGGCCGCG CGCACCGAGG CAAGCGGCGG CGACGCCACG
GCCGAGTGGC TGCGCGGCTG GACGGTCTTC TACTGGGCCT GGTGGATCAG CTGGACACCG
TTCGTCGGGC TGTTCATCGC CCGGATCAGC CGCGGCCGCA CCATCCGCCA GTTCGTCACC
GGCGTGCTGC TGGTGCCCAG CGTCGTGAGC CTGGTCTGGT TCGCCGTCTT CGGTGGGGCC
GGGATCGCCG CGCAGCGCAG CGGGGCCGAC GTCGCCGGTC AGGCGACGGC CGAGGGGCAG
CTGTTCGGCG TGCTGGAGAC GTTCCCGCTC GCCACGGTGA TGACCGTGCT GGTGATGCTG
CTCGTCGGCG GGGACGAGGC GCTCACCGGC CTGCAGAACC TGACGATCAT CGCGGCGCTG
CCGTTCGCCC TGGTGATGGC GGGACTGGCG GTGGCGCTGG CCAGGGACGT GCGCTCCGAT
CCGGTGGTGC TGCGGCGCAC GGCCGCCGCG GAGGCGGTCG AGCAGGCCGT CGTCGACGGC
ATCACCAGGC ACGGCGAGGA CTTCGTGCTG GTGGTCGAGC CGGCGCCGGA CGCCGACCGC
GACGGCATCC CGGACACCGC CATCGGCACC ACCCCGCGGC CGGCCGCGGA GCACCGCGGC
TCCGGCGGCG ACCGGACGGT GCGCGACGTC GGCTCGCCGA TCCCCGACGC GGGCGCGCGG
GTCCCCGACG GCGGCCGATG A
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| Protein sequence | MPKGPVVERG EGGAPVPART ILTTPPAHAS TSGAAQAHPA VAPPPPSPAD RGGSLDRVVF
GVAAVVALAF VAWGFASPQG LGSVSGTALE WVETNLGWLF VLLASAFVVY VIWLAAGKYG
RIPLGRDDEA PEFRTVSWVA MMFSAGMGIG LMFFGVSEPL SHYVSPPPGT VAAETPEALQ
TALATTLFHW SLHPWAIYAV VGLAIAYGTF RRGRRQLFSA AFAPLFGRQR TEGPAGKVID
VLAIFATLFG SAASLGLGAL QIGSGMEILG WAGDLGNGLF VLIIAVLTAA FVASAVSGIA
KGIQWLANTN MVLAVVLAVF VFVVGPTIFI LNLLPAAIGN YFADLGEMAA RTEASGGDAT
AEWLRGWTVF YWAWWISWTP FVGLFIARIS RGRTIRQFVT GVLLVPSVVS LVWFAVFGGA
GIAAQRSGAD VAGQATAEGQ LFGVLETFPL ATVMTVLVML LVGGDEALTG LQNLTIIAAL
PFALVMAGLA VALARDVRSD PVVLRRTAAA EAVEQAVVDG ITRHGEDFVL VVEPAPDADR
DGIPDTAIGT TPRPAAEHRG SGGDRTVRDV GSPIPDAGAR VPDGGR
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