Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_4532 |
Symbol | |
ID | 8756229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4751365 |
End bp | 4753905 |
Gene Length | 2541 bp |
Protein Length | 846 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | diguanylate cyclase/phosphodiesterase |
Protein accession | YP_003411453 |
Protein GI | 284992899 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.946946 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCCGAGC AGGACGCCCT CGGACAGCGC GGGCACGTCG CCGCGCTGGG GCCGGCCACC ATCGGCTGGC TGGGCCTCGC CATCGCGCTG GTCGCCAGCT CCTTCGTGCT GCCCTGGCGC CTGGAGCCGG CCAGTCCGGT GGCCGTCTGC TTGGTCCTCG CCACGTTCGT GGTCGCCGAG TTCTACAACC TCCACATCGA GTTCCGCCGT CAGACGATGT CCGTCTCGGC CTCCGAACTG GCCTTCGTCG TGGCGCTCAT CGAGATCGGT CCCGTGTGGA CCGCGCTGAC GCGCGCGCTG GCCATCGCCG GCTTCTGCAT CGTGCAGCGG CTGTCGTTGC CGAAGGTCGT CACCAACACG GCCATCGCGG TCGTCGAGGT GTGTGTCGCC GTGGCCGTAC TGCGCGTACT GCCCGTCGGT GTCCTCTCGG ATCCGCTGAC CTGGGTGTCC TACCTCGTCG CGATCGTGCT CGCCACGCTC GTGGGAGGCG CGCTCATCCG CCTGGCCATC ATCGCCACCC AGGGTTACCC CGGCAGGGCG CTCTGGACGA GCATGCTGCT TGCCGCCGTC GCGGTCACCC CCATGGCGGT CCTCGTCGGA CTGTCCGCGC TCCTCCTGGT CGAGGTGACG CCGTGGACGC TCCTCCTGGT CATGCCGCTC GTGGGCGGCC TCGTCCTCCT CTACCGCAGG TTCGCCGCGG TCTCGCGGGA GGGGCAGGAC CTCGAAAAGG TCTACGCGTT CGCTCGTCAG GTCGAGCAGA TCAGCCCCGA CGAGGACGGC CCGCGGCGCC TCGCCGAGGG CATCCGGGAG CTCCTCAACG CCGAGCGCGT CGCCCTCTGG CTGCCGCCCT ACCTCGACGA GGAGCCGCGC CTGGTCGTCG CCTCCGACGA CGGCCGCAGC TGGTACGACG GCCCCAGTGA CCCCGACGAC CTCTTCCGCC GGCGCGTGAC CGACGGGTCG TCGGACGGTC CGCTCCTGGT CTCCCTCGCC CGCGCGACCG AGGCCGAGGC CACCGCGCTG ACGCGCCGCG GAGCCCACGA CCTGCTCGCC GCGCCGGTGG CCACGGCGGC CGGAGAGCCC GGTTACCTGG AGATCTGCGA CCGGCGCAGC GACATCGTCT CCTTCGCGGA CGGCGACCGG TCGGCGCTGG ACTCCATGCT CACCCACGTC AACGCCGCGA TCCGGCAGCA GCAGCTGCTG ACCCAGATCC GGTACGACGC CGACCACGAC CGGCTCACCG GCCTGCCCAA CCGGCAGCGC CTCGCGGTGG AGATCGACGA GCTGCTCGTG GCCGACCCGG TCACCGGGCG GGCGGGCCTC ATCCTCGCCT CGCTGGACAA CTACGCCGAG GTCACCGACA CCCTCGGCCA CGCGGCCAGC GACGAGCTGC TGCTCGTCAC CGCCGGCCTG CTGCGCGAGC ACGCCCCGCC GCAGGCCCTC GTGGCCCGCA TGGAGGGCGA GCAGTTCGCC GTCCTGCTGC CCGGGCTGTC GCTGCCCGCG ACCGAGCGGG CGGCCCGCCG GCTGCGCGAG GCCACCTCGA CGCGCGTCCG GGTCGCCGGC CTGGACCTCG AGGTGACGCT GACCATCGGT GTCGCCGCCG CTCCGGTGCA CGGCGCGGAC TCCGGCACGC TCATGCAGCG GGCCGACGTC GCCCTGCTGG CCGGGGCCGG CAAGAGCGGC GTGGCCAGCT ACCACCCGGT GCTCGACCAG CAGAGCCTGC GGCGCCTGCA GCTCGGCACC GAGCTCGAGC AGGCCATGGC CGACGGCGAC ATCAGTGTCG TCTTCCAGCC GATCATCGAC GCACGCACCT CCGACATCGT CTCGGTCGAG ACGTTGGTGC GCTGGGCGCA CCCGCGCTAC GGGGCCATCG CGCCGGACGA GTTCATCCAC CTCGCCGAGC AGATCGGCCG CATCGGTCCG CTGACCGATC ACGTGCTCGA CCTCGCGCTC GCCCGCTGCC GCCGGTGGCT CGACCAGGAC ATCGCGCTGT CGGTGGCGGT CAACCTCTCC GCCCGCTGCC TGACCGAGCC GGACCTGGTG GACCGGGTGC GCCGGGCGCT TCGCCGCCAC GGCGTCCCCG GGGAGCTGCT GACCCTGGAG CTGACCGAGG GCAGCGTCGT CGACGACTCG GTGCGCAGCA GCACCGTCCT GGCCGACCTG CACGCGCTGG GCATGCGGCT GTCGATGGAC GACTTCGGCA CCGGCTACTC CTCGCTGTCC CAGCTGCGCC AGCTGCCCAT CGACGAGGTG AAGATCGACA AGTCCTTCGT GCTGGGCATG TCGACCAGCC AGGGGGAGTC GTTCATCGCC CGCTCGATCA TCGAACTGGC CCACAACCTG GGTCTGCGGG TCGTGGCCGA GGGCGTCGAG GACGAACTGA CGCGCAACCT GCTCGCCGAG ATGGGCTGCG ACAAGCTGCA GGGCTTCCTG GTCAGCCGGC CGCTGCCCGA CCAGCGGCTG GAGAGCTGGA TCCTGGCCCG TACCGGCGTC CGCTCGGCCG TCGCCGGCAC GCCGCACCGA CGGCTGTTCG TGCGCTCCTG A
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Protein sequence | MAEQDALGQR GHVAALGPAT IGWLGLAIAL VASSFVLPWR LEPASPVAVC LVLATFVVAE FYNLHIEFRR QTMSVSASEL AFVVALIEIG PVWTALTRAL AIAGFCIVQR LSLPKVVTNT AIAVVEVCVA VAVLRVLPVG VLSDPLTWVS YLVAIVLATL VGGALIRLAI IATQGYPGRA LWTSMLLAAV AVTPMAVLVG LSALLLVEVT PWTLLLVMPL VGGLVLLYRR FAAVSREGQD LEKVYAFARQ VEQISPDEDG PRRLAEGIRE LLNAERVALW LPPYLDEEPR LVVASDDGRS WYDGPSDPDD LFRRRVTDGS SDGPLLVSLA RATEAEATAL TRRGAHDLLA APVATAAGEP GYLEICDRRS DIVSFADGDR SALDSMLTHV NAAIRQQQLL TQIRYDADHD RLTGLPNRQR LAVEIDELLV ADPVTGRAGL ILASLDNYAE VTDTLGHAAS DELLLVTAGL LREHAPPQAL VARMEGEQFA VLLPGLSLPA TERAARRLRE ATSTRVRVAG LDLEVTLTIG VAAAPVHGAD SGTLMQRADV ALLAGAGKSG VASYHPVLDQ QSLRRLQLGT ELEQAMADGD ISVVFQPIID ARTSDIVSVE TLVRWAHPRY GAIAPDEFIH LAEQIGRIGP LTDHVLDLAL ARCRRWLDQD IALSVAVNLS ARCLTEPDLV DRVRRALRRH GVPGELLTLE LTEGSVVDDS VRSSTVLADL HALGMRLSMD DFGTGYSSLS QLRQLPIDEV KIDKSFVLGM STSQGESFIA RSIIELAHNL GLRVVAEGVE DELTRNLLAE MGCDKLQGFL VSRPLPDQRL ESWILARTGV RSAVAGTPHR RLFVRS
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