Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3924 |
Symbol | |
ID | 8755609 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 4110682 |
End bp | 4115289 |
Gene Length | 4608 bp |
Protein Length | 1535 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | DEAD/H associated domain protein |
Protein accession | YP_003410864 |
Protein GI | 284992310 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCGCCC TCGACCGGTT CTCCGAGCCC ACCCGGGCCT GGTTCACCGG CGCCTTCGCC GAGCCCACCG CCGCCCAGGA GGGCGCCTGG CGAGCCATCA GCAGCGGCGG CCACGCCCTC GTCGTGGCCC CCACCGGCTC GGGCAAGACG CTCGCCGCCT TCCTGTGGTC GCTCGACCGG CTGGCCGGCA CACCGCCGCC GGCCGACGAG CAGGCCCGCT GCCGGGTCCT CTACGTCTCT CCTCTCAAGG CACTGGCCGT CGACGTCGAG CGCAACCTGC GCGCCCCGCT GACCGGCATC GGCCAGGCCG CGGCCCGGCT GGGCCTGCCG CGCCCGGAGA TCCAGGTCGG CACCCGGTCC GGCGACACCC CCGCCGAGGA GCGGCGCGCC TTCGCCCGCC GGCCCACCGA CATCCTCATC ACCACGCCCG AGTCGCTCTT CCTGCTGCTC ACGAGCTCGG CGCGCGAGGC GCTGCGCGGC GTCGAGACGG TGATCGTCGA CGAGGTCCAC GCGGTGGCCG ACACCAAGCG CGGCGCGCAC CTGGCCGTCT CCCTCGACCG GCTCGACGAG CTGCTGGAGC GCCCGGCACA GCGGATCGGC CTGTCGGCCA CGGTGCGCCC CGTCGAGGAG GTGGCCGCCT TCCTGGCCGG TGGCCGGCCG GTGGAGGTGG TCGCACCCGG GTCGGGGAAG CAGTGGGACC TCTCGGTCGT CGTCCCGGTC GAGGACATGA GCGCCCTCGG CCAGCCCACC GGCGAGCTCG ACGGCTCCGC GGCGGGCGAC CAGCCGCGGA CGTCGATCTG GCCGGCGGTG GAGGAACGGG TCCTCGACCT CGTGGAGGCC CACCGCAGCA CGATCGTCTT CGCCAACTCG CGGCGGCTGG CCGAGCGGCT GACCAGCCGG CTCAACGAGC TGGCCTACGA GCGGGCGACC GGCGAGCCCG TCCCGCCGGG CACCAACGCC GCCGCGTTGA TGGCGCAGGC CGGCTCCGGA GGCGGGGTGC CCGAAGGCGT GCAGCCGGTC GCCGCCGCCC ACCACGGCTC GGTGTCCCGC GAGCAGCGGG CGATCGTGGA GGAGGCGCTG AAGTCCGGGC GGCTGCCGGC GGTGGTGGCC ACCTCGAGCC TCGAGCTCGG CATCGACATG GGGGCGGTCG ACCTGGTCGT GCAGGTGGAG GCGCCGCCCA CGGTCGCGTC GGGCCTGCAG CGGGTCGGCC GCGCCGGCCA CCAGGTCGGC GCGGTCAGCC GGGGCGTGCT CTTCCCCAAG TACCGCGGCG ACCTGGTCCA GTGCGCGCTG GTCGCCGAAC GGATGAAGGC CGGCGCGATC GAGTCGATCC GCTACCTGCG CAACCCGCTC GACGTGCTGG CCCAGCAGGT GGTCGCGATC GTCTCCGAGC GGCCGCGGAC CGTCGACGAG GTCGCCGCAC TGGTCCGCCG GTCGGCGCCG TTCGCCTCGC TGCCGGACTC CGCGCTGCAC GCGGTGCTCG ACATGCTGGC CGGTCGCTAC CCCTCCGACG CCTTCGCCGA GCTGCGGCCG CGGCTGACCT GGGACCGGGT CACCGACACC CTGACCGCTC GCGGCGGCGC GCAGCGGCTG GCGGTCACCA GCGGCGGCAC CATCCCCGAC CGGGGCCTGT TCGGCGTCTT CCTCGTGGGC GGCGATGACA GCCGCGGCGG CCGGCGGGTC GGCGAGCTCG ACGAGGAGAT GGTCTACGAG TCACGGGTGG GAGACGTGTT CCTCCTCGGT TCCTCCTCCT GGCGGATCGA GGAGATCACC CACGACCGCG TGCTGGTGAG CCCCGCCCCC GGCCAGCCCG GGAAGATGCC GTTCTGGCAC GGCGACGCCC CCGGCCGCCC CCTGGAGCTG GGTCGTGCGC TGGGCGCCTT CCTCCGCGAG GTCGGCACCG CGACGCCCGA GGCCGGGCTC GACCGCGCCC GCGCCGCCGG CCTCGACGAG TGGGGCGCGG CCAACCTGCT GGCCTACCTC GCCGAGCAGA AGCAGGCCAC CGGGCACCTG CCCGACGACC GCACGCTGCT CGTGGAGCGC TTCCGCGACG AGCTCGGTGA CTGGCGGCTG GTCGTCCACT CCCCGTTCGG CGCGCAGGTC AACGCCCCGT GGGCGCTCGT GCTCGCCGCC CGGCTGCGGG AGCGCTACGG CGTGGACGTC GCCTCGATGC ACTCCGACGA CGGCATCGTG CTGCGGCTGC CCGACACCAC CGGCGAGCCG CCGGAGGCCG ACCTCGCCGT CCTGGACCCG GATGACGTCG AACGCGAGGT GACCGCCGAG GTCGGCAGCT CGGCGCTGTT CGCCAGCCGG TTCCGTGAGT GCGCGGCGCG GGCGCTGCTG CTCCCCCGCC GCGACCCGCG CCGGCGCACC CCGCTGTGGC AGCAACGGCA GCGCGCCGCA CAGCTGCTCT CGGTGGCCAG CGAGTTCTCC AGCTTCCCCA TCACGCTGGA GGCCGCCCGC GAGGTGCTGC AGGACGTCTA CGACGTGCCC GGCCTGGTCG AGCTGATGCG CGACGTCCGC TCCCGCCGGG TGCGGGTGGT CGACGTGCAG ACCCAGGCGG CCTCGCCGTT CGCCCAGTCG CTGCTGTTCG GCTACGTCGG CCAGTTCCTC TACGAGGGCG ACGCCCCGCT GGCCGAGCGG CGGGCGCAGG CGCTGGCCCT CGACACCGGC CTGCTCGCCG AGCTGCTGGG CCGCTCCGAG CTGAGGGAGC TGCTCGACGC CGAGGCGCTG ACCGAGGTGG AGAACGAGCT GCAGCGGCTG CCGGCCCAAC GCCACCCCCG CGACCTCGAC GGCGCCGCTG ACCTGCTGCG CATCGTTGGT GACCTCACCC CCGCCCAGGC CGCCGCCCGC GGCGTGGGCC GGGAGTGGCT CGACGAGCTG GTGGCCGCCC GCCGCGCGCT GGTGGTGCGC ATCGCCGGCG AGGAGCGGTA CGTGGCGATC GAGGACGCCG GCCGGCTGCG CGACGCCCTC GGCACGGCCC TGCCCGTCGG GGTGCCCGAG GTGTTCACCG AGCCGGTGCC CGACCCGCTC GGTGACCTGG TCGGCCGCTA CGCCCGCACG CACGGTCCCT TCCAGCCCGG TGAGGTGGCG CAGCGGCTGG GGCTGGGCGT CGCGGTGGTG ACCGCCACCG TGCAACGGCT GGTCGGCACC GGCCGCCTCG TCACCGGCGA GTTCCGTCCC GGCGGCTCCG GCCAGGAGTG GTGCGACGCC GACGTGCTCC GGTCGGTCCG CCGGCGCAGC CTGGCCCGGC TGCGCCAGGA GGTGGAGCCG GTGCCGATCG GCACGCTGGC GCGCTTCACC CCGTCCTGGC AGTCGGTGGG CAGCCGGATG CGCGGCCCGG ACGGCGTCCT CGCGGTCGTC GAGCAGCTGG CGGGCGCCCT CGTGCCGGCC AGCGCACTGG AGTCGCTGGT GCTGCCGGCC CGGGTCCGCG ACTACTCCCC CGCGATGCTC GACGAGCTGA CGAGCGCCGG CGAGGTGCTG TGGGCCGGTG CGGGTGGGCT GCCCGGCGGT GACGGCTGGG TCAGCCTGGT CCCGGCCGAC CTCGCTCCGC TCCTGCTCCC CGAGCCACTC GAGCTGCCCG AGGCGGGGTC CACCGTGCTG GGCCCGCTGT CCGGCGGTCA GGCGCTGTTC TTCCGCGGGT TGTCGGACCT GGCCGGCTCC ACCGACGACG CCGCCTTCGC CGACCTCGTG TGGGACCTCG TCTGGTCCGG CGTGCTCACC AACGACACCC TCGCGCCGCT GCGCACCCGG CTGTCCGGCG GCGGCACGCA CAAGCGCCAG CCCGCGCCGC CCCGGGCCCG GCTGGACCGC AGCCGCTACG GCCGCACCCG GCTGGGCCGG CCGGCCATGC CGACCCGCAG CGGCCCACCG ACGATGGCCG GCCGGTGGTC CCGGCTGCCC GACCGGGAGC CCAACGCCAC CAAGCGGACG ACGGCCCGCG CCGAGGCGCT GCTCGAGCGG CACGGCGTGC TCACCCGCGG CGCGGTGGTG GCCGAGCAGG TCTCGGGGGG CTTCTCCGCG GTGTACCCGG TCCTGCGGGC CTTCGAGGAG AACGGCCGGG CCCGTCGCGG CTACTTCGTG GAGACCCTCG GCGCCGCCCA GTTCGGCACG CCGGGGTCGG TCGACCGGCT GCGCGGTTTC GCCTCCCCCG ACCGGGTGCC CAGCGGCGCG GTGGTGCTGG CCGCGACCGA CCCGGCCAAC GTCTACGGCG CGGCGCTCCC CTGGCCCGAG CGCCCGGACG GCGCCTCCGC CGAGCCGGGC AGCGACGCGG GCGCGGCGGT CGACGTCGGT GAGGGCACCG GCGGCGGACG GCGCTCCACC GGGCACCGAG CCGGGCGGAA GGCCGGCGCG CTGGTGGTGC TGGTCGACGG CGAGCTGGTG CTCTACGTCG AGCGCGGCGG CAAGACGCTG CTGTCCTGGA CCGAGGACGA GACCGCGCTC AAGGAGGCCG CGACGGCGCT GTCCGGGGCG GTCGCGGCGG GCGCGCTGGG CCGGATGGTG GTGCAGAAGG CCGACGGCGC CTCGGTGCAC GAGGCGACCC CGCTGTCGGC CGCGCTGCAG GCGGCCGGCT TCGCCGCCAC CCCCCGCGGC CTGCGCCTGC GCGCCTGA
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Protein sequence | MPALDRFSEP TRAWFTGAFA EPTAAQEGAW RAISSGGHAL VVAPTGSGKT LAAFLWSLDR LAGTPPPADE QARCRVLYVS PLKALAVDVE RNLRAPLTGI GQAAARLGLP RPEIQVGTRS GDTPAEERRA FARRPTDILI TTPESLFLLL TSSAREALRG VETVIVDEVH AVADTKRGAH LAVSLDRLDE LLERPAQRIG LSATVRPVEE VAAFLAGGRP VEVVAPGSGK QWDLSVVVPV EDMSALGQPT GELDGSAAGD QPRTSIWPAV EERVLDLVEA HRSTIVFANS RRLAERLTSR LNELAYERAT GEPVPPGTNA AALMAQAGSG GGVPEGVQPV AAAHHGSVSR EQRAIVEEAL KSGRLPAVVA TSSLELGIDM GAVDLVVQVE APPTVASGLQ RVGRAGHQVG AVSRGVLFPK YRGDLVQCAL VAERMKAGAI ESIRYLRNPL DVLAQQVVAI VSERPRTVDE VAALVRRSAP FASLPDSALH AVLDMLAGRY PSDAFAELRP RLTWDRVTDT LTARGGAQRL AVTSGGTIPD RGLFGVFLVG GDDSRGGRRV GELDEEMVYE SRVGDVFLLG SSSWRIEEIT HDRVLVSPAP GQPGKMPFWH GDAPGRPLEL GRALGAFLRE VGTATPEAGL DRARAAGLDE WGAANLLAYL AEQKQATGHL PDDRTLLVER FRDELGDWRL VVHSPFGAQV NAPWALVLAA RLRERYGVDV ASMHSDDGIV LRLPDTTGEP PEADLAVLDP DDVEREVTAE VGSSALFASR FRECAARALL LPRRDPRRRT PLWQQRQRAA QLLSVASEFS SFPITLEAAR EVLQDVYDVP GLVELMRDVR SRRVRVVDVQ TQAASPFAQS LLFGYVGQFL YEGDAPLAER RAQALALDTG LLAELLGRSE LRELLDAEAL TEVENELQRL PAQRHPRDLD GAADLLRIVG DLTPAQAAAR GVGREWLDEL VAARRALVVR IAGEERYVAI EDAGRLRDAL GTALPVGVPE VFTEPVPDPL GDLVGRYART HGPFQPGEVA QRLGLGVAVV TATVQRLVGT GRLVTGEFRP GGSGQEWCDA DVLRSVRRRS LARLRQEVEP VPIGTLARFT PSWQSVGSRM RGPDGVLAVV EQLAGALVPA SALESLVLPA RVRDYSPAML DELTSAGEVL WAGAGGLPGG DGWVSLVPAD LAPLLLPEPL ELPEAGSTVL GPLSGGQALF FRGLSDLAGS TDDAAFADLV WDLVWSGVLT NDTLAPLRTR LSGGGTHKRQ PAPPRARLDR SRYGRTRLGR PAMPTRSGPP TMAGRWSRLP DREPNATKRT TARAEALLER HGVLTRGAVV AEQVSGGFSA VYPVLRAFEE NGRARRGYFV ETLGAAQFGT PGSVDRLRGF ASPDRVPSGA VVLAATDPAN VYGAALPWPE RPDGASAEPG SDAGAAVDVG EGTGGGRRST GHRAGRKAGA LVVLVDGELV LYVERGGKTL LSWTEDETAL KEAATALSGA VAAGALGRMV VQKADGASVH EATPLSAALQ AAGFAATPRG LRLRA
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