Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3330 |
Symbol | |
ID | 8755011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 3499978 |
End bp | 3501828 |
Gene Length | 1851 bp |
Protein Length | 616 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003410305 |
Protein GI | 284991751 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGCGAGT TCAGCGTCCC CGCGACCACC GAGGTGGGCC CCGACGAGGC CCTGACCGAC ATGCTGGTCG AGAACGTCAC CCGGCACGGC GACGAGACCG GGTTGCGGCG TCGGGTGGAC GGCCGGTGGG TCGACGTGTC CTGGCGGCAG TTCGGCGAAG AGGTCCGCGG CGTCGCCAAG GGGCTGATCG CCGCGGGGGT GGCCGCCGGT GACCGCGTCG CCCTGCAGGC CAAGACGCGT TACGAGTGGA CGGTCCTCGA CTACGCCATC TGGACCGCCG GCGGCGTCGT CGTCCCGATC TACGAGACCT CCAGCGCCGA CCAGGTCGCC TGGATCCTCT CCGACTCCGG CGCCACCGCC GTCGTCGTGG AGCGGGACGA GCACGCCGCG GCCGTCGAGT CGGTCCGTGA CCAGGCACCG GACCTCTCGG CCGTCTTCGT CATCGAGGAC GACGCCGTCG GGACGCTCAC CGTCGCCGGC CAGGACGTCC CCGACAGCGA GCTCGACGCC CGCCGGGCCA CCCTGGACGC CGACAGCCCG GCCACGCTGA TCTACACCAG CGGCACCACC GGCCGGCCCA AGGGCTGCGA GCTGACGCAC CGCAACTTCC TGTTCGAGAT CGGCAACGGC ATCACGCTGC TGGACCGGTT CATCAACGCG CAGAGCTCGC TGCTGCTGTT CATCCCGCTG GCGCACGTGC TGGCCCGCGT CCTGCAGGTC GGCGCGGTGA GGAACCGCAC GGTCATCGGC CACACGCCGG ACGTGAAGAA CCTGGTCGAG GACCTCGGCG AGTTCCGGCC GACCTTCGTG CTCGCCGTCC CCCGGGTGTT CGAGAAGGTC TACAACTCCG CCAAGGCCAA GGCGGAGGGC GACGGCAAGG GCAAGATCTT CGACCGGGCC GCGCAGGTGG CCATCGACTG GTCCCGCGCC CAGGACACCG GCGGTCCCGG CCTCGCGCTG CGCGCCCAGC ACGCCCTGTT CGACCGGCTG GTCTACGGCA AGCTGCGCGC CGCCCTGGGC GGCCGCTGCC AGGGCGCCAT CTCCGGCGGC GCCCCCCTCG GCGAGCGGCT CGGCCACTTC TTCCGCGGCA TCGGCGTTCC CGTCTTCGAG GGCTACGGCC TGACCGAGAC CACCGCCGCC GCGTCGGTCA ACCACGACGG CGCGCTGCGC ATCGGCACCG TCGGCCGCCC GCTGCCCGGC GTCGGCTTCG CGATCGCCGA GGACGGCGAG ATCCTCATCC GCGGCGGCAT CGTCATGCGC GGCTACTGGC GGAACGAGGC CGCGACGACG GAGGCCATCG ACGCCGACGG CTGGTTCCAC AGCGGCGACC TCGGCGAGAT CGACGCCGAC GGGTTCGTCA AGATCACCGG GCGCAAGAAG GAGATCCTGG TGACCGCGGG CGGCAAGAAC GTCGCCCCCG CCGTGCTCGA GGACCGGCTG CGCGCCCACC GCCTGGTCAG CCAGTGCATC GTCGTCGGCG ACCAGCGGCC CTACATCGCC GCCCTGGTCA CCCTCGACGA GGAGGCGCTG CCGCTGTGGC TGCAGTCCCA GGGGAAGGAC GCCGGCCTCA CCGCCGCCCA GCTCGCCGAG GACCCCGACG TGCTGGCCGA GCTCGACGCG GCCGTCGCGG ACGCCAACAA GGCGGTGTCC CAGGCCGAGG CGATCAAGCG GTTCCGGGTG CTGGGCACCG ACTTCACCGA GGACAACGGG ATGCTCACGC CGAGCCTGAA GCTCAAGCGC TCCGTGGTGC TCAAGGAGTT CGACGCCGAG GTCGAGGGGC TCTACCAGAA GAACCCCGCT GCCCCCTCTC CCTCGCAGGC TCGGGGCGGG ACCCTGCAGC AGGGCCGTTA G
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Protein sequence | MREFSVPATT EVGPDEALTD MLVENVTRHG DETGLRRRVD GRWVDVSWRQ FGEEVRGVAK GLIAAGVAAG DRVALQAKTR YEWTVLDYAI WTAGGVVVPI YETSSADQVA WILSDSGATA VVVERDEHAA AVESVRDQAP DLSAVFVIED DAVGTLTVAG QDVPDSELDA RRATLDADSP ATLIYTSGTT GRPKGCELTH RNFLFEIGNG ITLLDRFINA QSSLLLFIPL AHVLARVLQV GAVRNRTVIG HTPDVKNLVE DLGEFRPTFV LAVPRVFEKV YNSAKAKAEG DGKGKIFDRA AQVAIDWSRA QDTGGPGLAL RAQHALFDRL VYGKLRAALG GRCQGAISGG APLGERLGHF FRGIGVPVFE GYGLTETTAA ASVNHDGALR IGTVGRPLPG VGFAIAEDGE ILIRGGIVMR GYWRNEAATT EAIDADGWFH SGDLGEIDAD GFVKITGRKK EILVTAGGKN VAPAVLEDRL RAHRLVSQCI VVGDQRPYIA ALVTLDEEAL PLWLQSQGKD AGLTAAQLAE DPDVLAELDA AVADANKAVS QAEAIKRFRV LGTDFTEDNG MLTPSLKLKR SVVLKEFDAE VEGLYQKNPA APSPSQARGG TLQQGR
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