| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2764 |
|---|
| Symbol | |
|---|
| ID | 8754436 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2880016 |
|---|
| End bp | 2881014 |
|---|
| Gene Length | 999 bp |
|---|
| Protein Length | 332 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | Xylose isomerase domain protein TIM barrel |
|---|
| Protein accession | YP_003409765 |
|---|
| Protein GI | 284991211 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.455459 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTGA AGCTCGGTGC CTACACCGCC TGCCTGCACG ACCGTCCGCT GGAGGAGGCC
CTCGACGTGC TGCAGGCCGA CGGCCTGACC TCCGTCGAGG TGAACACCGG CGGCTTCATC
CCCTCACCGC ACTGCCACGT CGACCTGCTG CTCTCCTCCG AGCAGGCCCG GCGCGACTAC
TTGGAGACCT TCTCCTCCCG CGGGATGGAG CTGACCGGGC TCAACTGCAA CGGCAACCCG
CTGAACCCGC TGCCCGGCGT CGGCCCGAAG CACGCCGACG ACCTGCGCCG CACCATCGAG
CTGGCCGGCC TGCTCGGGGT GAGGCACGTG GTGACGATGT CGGGCACGCC CGGGTCGGAC
CCCGACGCCA GGTACCCCTC CTGGGTGGTC AACCCGTGGG ACGGCGTCTA CATGGACGTC
CTGGACTACC AGTGGGGCGT CGCGGCCGAG TTCTGGACGG AGATCGACGC CCTCGCCCGC
GCCTCCGACG TCCGGGTGGC CATCGAGATG CACCCGCACA ACCTGGTGTT CTCGCCGGTG
ACCCTGCGCA GGCTGGTCGA CACCATCGGC GCCACGAACA CCGGCGCCGA GATGGACCCC
TCGCACCTGA TGTGGCAGGG CATGGACGTC GTGGCCTGCA TCCGCGACCT CGGCCCGCTG
GTGTTCCACG CCGCGGCCAA GGACGCGATG ATCACCCCCG GGGTCGACAT CCGCGGGGTG
CTCGACACCT CGTTCGAGCG CGTCCCGGCC GACGCCCCGG GCAAGGTGCC CACCGGCTAC
GGCTTCTGGT GCAACGCCTG GCCGGAGAAC CCCGGCTGGC GGTTCGTGGC CGTGGGCGTC
GGCCACGACG TCGACTGGTG GGCGGAGTTC CTGCGCGCCC TCGCCGACGT CGACCCCGAC
ATGGCGGTCA ACATCGAGCA CGAGGACGCC GCCTACGACC GTCTCGAGGG CCTGGCGCTC
GCCGCCGAGA ACCTGCGCGC CGCGGCCGAG AAGCTGTAG
|
|---|
| Protein sequence | MSLKLGAYTA CLHDRPLEEA LDVLQADGLT SVEVNTGGFI PSPHCHVDLL LSSEQARRDY
LETFSSRGME LTGLNCNGNP LNPLPGVGPK HADDLRRTIE LAGLLGVRHV VTMSGTPGSD
PDARYPSWVV NPWDGVYMDV LDYQWGVAAE FWTEIDALAR ASDVRVAIEM HPHNLVFSPV
TLRRLVDTIG ATNTGAEMDP SHLMWQGMDV VACIRDLGPL VFHAAAKDAM ITPGVDIRGV
LDTSFERVPA DAPGKVPTGY GFWCNAWPEN PGWRFVAVGV GHDVDWWAEF LRALADVDPD
MAVNIEHEDA AYDRLEGLAL AAENLRAAAE KL
|
|---|
| |