| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2692 |
|---|
| Symbol | |
|---|
| ID | 8754364 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 2800323 |
|---|
| End bp | 2803178 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_003409696 |
|---|
| Protein GI | 284991142 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.517948 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGCC CCGCTGAGCG GTACGCGGCT GCCCGTCGGC GCGGTGCCCA CCCCGCACTG
GCCGACTTCA CCGCGCAGCT CGGCTTCTCC CTCGACCCCT TCCAGGTGCA GGCCTGCGAG
GCGCTCGACG AGGGTTCCGG CGTCCTGGTC TGCGCGCCGA CCGGCGCGGG CAAGACGGTG
GTGGGGGAGT TCGCCGTCCA CAAGGCGCTG GCCGAGGGGC GCAAGGCCTT CTACACGACG
CCGATCAAGG CGCTGTCCAA CCAGAAGTAC AACGACCTCG CCGAGCGCTA CGGCGAGGGG
AAGGTCGGCC TGCTCACCGG GGACAACGCC ATCAACGGCG ACGCGCCCGT GGTGGTGATG
ACCACCGAGG TGCTGCGCAA CATGCTCTAC GCCGAGTCCC CGGCGATCGA CGGGCTCGGC
TACGTCGTCA TGGACGAGGT GCACTACCTC GCCGACCGCT TCCGCGGCGC GGTGTGGGAG
GAGGTGATCA TCCACCTCCC GCAGTCGGTG ACCCTGGTGT CCCTGTCCGC GACGGTGAGC
AACGCCGAGG AGTTCGCCGA CTGGCTGGTC ACCGTCCGCG GCCACACCGA GGTCGTCGTC
AGCGAGGTCC GGCCGATCCC GCTGTGGCAG CACATGCTGG TCGGCAACCG GGTGTTCGAC
CTGTTCAGCC TGCGCCCGGC CGCGCACGCC GCCGAGCAGG GCGACGACCC GCGCGGGCAG
TCCACCCGCG AGCGCGGCGC CAGCGTCGTC GACCCCGAGC TGGTCCGCTA CGTGCGCGAG
CACGAGCGGC GGATGGACAC CTGGGGCGGT GGCAACGGCG GCTCGCGCCG GGAGCGGGAC
TGGCACAAGC CGCGCTACAA GCCGCCGGCC CGCGCCGACG TCATCGAGCG GCTGGACCGC
TCGGGACTGC TGCCGGCCAT CACCTTCGTC TTCAGCCGCA ACGGCTGCGA CGCGGCGGTC
GACCAGTGCC TGCGGGCCGG GCTGCGGCTC ACCGACGAGC ACGAGCGCTC GGAGATCGCC
GCCATCATCG ACGAGAGGAC CGGCTCGCTG CCGGAGGAGG ACCTGCACGT CCTCGGCTTC
TGGGAGTGGC GCGAGGGCCT GCTGGCCGGG CTGGCCGCGC ACCACGCCGG CCTGGTCCCG
GCGTTCAAGG AGACCGTGGA GGAGTGCTTC GTCCGCGGTC TGGTCAAGGC CGTGTTCGCC
ACCGAGACCC TCGCCCTGGG CATCAACATG CCGGCGCGCA CCGTCGTCCT CGAGCGGCTG
GTCAAGTGGA ACGGCGAGGC GCACGTCGAC GTCACGCCGG GGGAGTACAC CCAGCTCACC
GGACGGGCCG GGCGGCGCGG CATCGACGTC GAGGGGCACG CCGTCGTCGT GTGGGCGCCG
GGCATGGACC CCTCCGTCGT CGCCGGGCTG GCCAGCACCC GCACCTACCC GCTGAAGTCC
TCCTTCCGGC CCAGCTACAA CATGGCCGTC AACCTGGTCA GCTCCTTCGG GCGGGCCAAC
GCCCGCGAGC TGCTGGCCTC GTCCTTCGCC CAGTTCCAGG CCGACCGCTC GGTGGTCGGG
CTGGCCCGCG CCGCCGCCCG CCACGAGCGC GACGCCGAGC GCTGGGCCGC CGAGATGCAC
TCGGAGGGCG GCGACGTCGC GGGGTACGCA CGGCTGCGCC AGGACATCGC CGAGCGGGAG
AAGGAGCTCT CCCGCGACTC GGCGGCCAAG CGCCGGATCG AGGCCTCCGA CGCGCTGGCG
GCGCTGCGGC CCGGCGACGT CATCCGCGTG CCGTCGGGAC GGCGGCAGGG ACTGGCCGTC
GTCCTCGACC CCGGGGTGAC CGACCTGACC GAGCCGCGCC CCCTGGTGCT CACCGAGGAC
AAGTGGGCCG GGCGCCTCGG TGCCGTCGAC TTCCCCACGC CGGTCACCGC GCTGGCCCGG
GTGCGGGTGC CCAGGAACTT CAACCACCGC AGCCCGCACG CCCGGCGGGA CCTGGCCGCC
ACGCTGCGCA ACGCGCGCGT GGAGAACGAC CTGGGCGCGC GGCGGGTCAG GCAGCGCTCC
GCGGCCGCCG ACGACCCGGT GCTGCACGAC CTGCGGCGGG CGCTGCGGGC CCACCCGGTG
CACGCCCTGC CCGACCGCGA GGAGCGCGTG CGGGCGGCCG AGCGCTGGCT GCGGGCCACC
CGGGAGGCCG AGGCCACCCA CCGTCGGATG GCCGAGCGCA CCGGCTCGCT GACCCGCCAG
TTCGACCGCA CCTGCGACGT CCTCGAGGAG CTGGGCTACC TGGTGCCCGA CCCGGCGGCC
CCGCCGGTGA CCGCGGGGGA GGACCCGGTG GACCACGAGG TCGCAGACGT CGCCCCGGTC
GTGACCGACG ACGGCCGGCG GCTGGCCCGC ATCTGGTCGG AGGCCGACCT GCTCGTCGCC
GAGTGCCTGC GCTCGGGCGT GTGGCGCGGG CTCACCCCGG CCGAGCTCGC CGCCGCGGTG
TCCACGCTGG TGTTCGAGGC CCGGCGGGAG ATGCCCGGCC AGCCGGCGGT GCCGGCCGGC
AAGGTGTCGG CGGCGATCGC GGAGATGCGG CGGATCCGCG CGCGGCTGCA GGACGTCGAG
CTCGACCACG GTGTGCCGGC CGGCCGCGAC CTGGACCTCG GCTTCGCCTG GGCGGCCTAC
CGCTGGGCCG ACGGGCAGAG CCTGGACCGG GTCCTGGCCG GGGCCGAGCA GGCGGGTACC
GAGCTCTCCG GTGGGGACTT CGTCCGCTGG GCGCGCCAGT TGCTGGACCT GCTCGACCAG
CTGGCCAAGG TCGCCGACGG CCAGCTGGCC ACCACGGCCC GGGCGACGGT GGACCGGGTA
CGGCGCGGCG TGGTCGCCGT AGCGGTCGGC GGCTGA
|
|---|
| Protein sequence | MSSPAERYAA ARRRGAHPAL ADFTAQLGFS LDPFQVQACE ALDEGSGVLV CAPTGAGKTV
VGEFAVHKAL AEGRKAFYTT PIKALSNQKY NDLAERYGEG KVGLLTGDNA INGDAPVVVM
TTEVLRNMLY AESPAIDGLG YVVMDEVHYL ADRFRGAVWE EVIIHLPQSV TLVSLSATVS
NAEEFADWLV TVRGHTEVVV SEVRPIPLWQ HMLVGNRVFD LFSLRPAAHA AEQGDDPRGQ
STRERGASVV DPELVRYVRE HERRMDTWGG GNGGSRRERD WHKPRYKPPA RADVIERLDR
SGLLPAITFV FSRNGCDAAV DQCLRAGLRL TDEHERSEIA AIIDERTGSL PEEDLHVLGF
WEWREGLLAG LAAHHAGLVP AFKETVEECF VRGLVKAVFA TETLALGINM PARTVVLERL
VKWNGEAHVD VTPGEYTQLT GRAGRRGIDV EGHAVVVWAP GMDPSVVAGL ASTRTYPLKS
SFRPSYNMAV NLVSSFGRAN ARELLASSFA QFQADRSVVG LARAAARHER DAERWAAEMH
SEGGDVAGYA RLRQDIAERE KELSRDSAAK RRIEASDALA ALRPGDVIRV PSGRRQGLAV
VLDPGVTDLT EPRPLVLTED KWAGRLGAVD FPTPVTALAR VRVPRNFNHR SPHARRDLAA
TLRNARVEND LGARRVRQRS AAADDPVLHD LRRALRAHPV HALPDREERV RAAERWLRAT
REAEATHRRM AERTGSLTRQ FDRTCDVLEE LGYLVPDPAA PPVTAGEDPV DHEVADVAPV
VTDDGRRLAR IWSEADLLVA ECLRSGVWRG LTPAELAAAV STLVFEARRE MPGQPAVPAG
KVSAAIAEMR RIRARLQDVE LDHGVPAGRD LDLGFAWAAY RWADGQSLDR VLAGAEQAGT
ELSGGDFVRW ARQLLDLLDQ LAKVADGQLA TTARATVDRV RRGVVAVAVG G
|
|---|
| |