Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_2451 |
Symbol | |
ID | 8754122 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 2548747 |
End bp | 2550477 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | PQQ-dependent dehydrogenase, methanol/ethanol family |
Protein accession | YP_003409493 |
Protein GI | 284990939 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGACA TCCAGGACAA GACCGGGATC GAGTACGGAG AGGCCCCGCC GGCAGTCGAC TTCGGGTCGC TGACCACCGC GCCCGGGAAC GCGCCGCCCG TGGTCCAGGA CGTGACGTAC GAGCGCATCC TCGACGCCCG ATCGGAACCG CAGAACTGGC TCACCTACTA CGGCGCCTAC GACGGGCAGC GGTACAGCCC GCTCGACCAG ATCAACAGGG AGAACGTCGT CCGCCTCACC CCGGCCTGGG TGTTCAGCTT CTCGCCCCAC GGGCTGCACG CCGGCCAGTC GACGTACGCC TTCGAGACCA GCCCGATCAT CGTCGAGGGC GTCATGTACG TCTCCGGGTG GGACGGCTGG GTCTGGGCGC TCGACGCCAA GACCGGGCAG CTGCTGTGGC AGTACAAGCA CGCGATCCCC TTCGACGTCT CGCTGTGCTG CGGCAACGTC AACCGCGGGG TCGCCGTGGC GAAGGGCAAG GTCTTCGTCT GCACGCTCAA CGCCCACGTG CTCGCGCTGG ACGCCGCCAC CGGTGAGTGC ATCTGGGACG TCACCAGCGG GGACGTCCGC GCCGGGGAGA GCCTCACGGT GGCCCCGCTC GTCGTGAAGG ACCGGGTCGT CGTCGGCAGC TCCGGCGGGG AGTTCGGGGT GCGCGGCCAC CTCGACGCCT ACGACATGGA GACCGGGGAG CGGATGTGGC GCTGCTACAC GATCCCCAAG CCCGGCGAGC CGGGCTCGGA GACCTGGCCG CAGGACGGTG AGGCCTGGGC GCGGGGCGGC GGCAACTGCT GGGTCACCGG GACCTTCGAC CCGGAGACGA ACCTCCTGTA CTGGGGGACC GGCAACCCCG CGCCCGACTT CGACGGGGAG GTCCGACCGG GGGACAACCT CTACACCGAC AGCGTGATCG CGGTGGACGC CGACACCGGG GAGATCCGTT GGCACTACCA GTGCACCCCT CACGACCTGT GGGACTACGA CTCGAACATG GAGTGCATCC TGTTCGAGGA GGACGGGCGC AAGCTCCTGG CCCACTTCGA CAAGAACGGG TACTGCTTCG TCCTGGACCG CACCACCGGC GAGCGGGTGC GGATTTTCCC CTTCGTCGAC CGGATCACCT GGGGTGAGAT CAGCCCCGAC GGCACGGTGA CGCCCAGGAT CTACCCGGAC AAGGAAGGCG AGGAGGTGCA CTTCCACCCG GGGCCGGCCG GGGCCAAGGA GTGGACCCAC GCGTCGTACA GCCCCAGGAC GGGCCTGTTC TACGTCCCGG TGCAGGACAC CGGCGCGAAG GTCGCCCGCC GGCGCCGGGA GTTCAAGGAG AGCATCCCCT ACTGGGGCGC GGCGGTCACC GTGGACGCCG AGGACATGGC CGGGTCGGTG ACGGCGTTCA ACGCCTCCGG TGAGGAGGTG TGGCGCTGGC GCAACGACCT GCCGATGTGC GCGTCGGTGC TCAGCACGGC GGGCGACGTG GTCTTCGCCG GCACGCCGTC CGGCACGTTC GTGGCCCTCG ACGCCCGCAG CGGCGAGTTC CTGTGGCAGT TCAACTGCGG CAGCGGCCAC CACAGCAGCC CGAGCACCTA CAGCGTCGAG GGCAAGCAGT ACATCGCCGT GCCGGTCGGC TGGGGCGCCT GGGTCGAGGG GTTCCTGCCC GGGATGATGG GCGGCCCCCA CGGACAGGCG ATGTTCGTCT TCTCGCTGCC CGAGGACATC GACTCGGCCG GGGGGAGGTG A
|
Protein sequence | MTDIQDKTGI EYGEAPPAVD FGSLTTAPGN APPVVQDVTY ERILDARSEP QNWLTYYGAY DGQRYSPLDQ INRENVVRLT PAWVFSFSPH GLHAGQSTYA FETSPIIVEG VMYVSGWDGW VWALDAKTGQ LLWQYKHAIP FDVSLCCGNV NRGVAVAKGK VFVCTLNAHV LALDAATGEC IWDVTSGDVR AGESLTVAPL VVKDRVVVGS SGGEFGVRGH LDAYDMETGE RMWRCYTIPK PGEPGSETWP QDGEAWARGG GNCWVTGTFD PETNLLYWGT GNPAPDFDGE VRPGDNLYTD SVIAVDADTG EIRWHYQCTP HDLWDYDSNM ECILFEEDGR KLLAHFDKNG YCFVLDRTTG ERVRIFPFVD RITWGEISPD GTVTPRIYPD KEGEEVHFHP GPAGAKEWTH ASYSPRTGLF YVPVQDTGAK VARRRREFKE SIPYWGAAVT VDAEDMAGSV TAFNASGEEV WRWRNDLPMC ASVLSTAGDV VFAGTPSGTF VALDARSGEF LWQFNCGSGH HSSPSTYSVE GKQYIAVPVG WGAWVEGFLP GMMGGPHGQA MFVFSLPEDI DSAGGR
|
| |