| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_2442 |
|---|
| Symbol | |
|---|
| ID | 8754113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 2538820 |
|---|
| End bp | 2540529 |
|---|
| Gene Length | 1710 bp |
|---|
| Protein Length | 569 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | Dihydroxy-acid dehydratase |
|---|
| Protein accession | YP_003409484 |
|---|
| Protein GI | 284990930 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGCTCC GGAGCGCGCA GTGGTACGCG GGGGACGCCC GCAACGCCTA CATCCACCGG
GCCTGGATGC GCCGCGGCGT GCCGGGCGAC GCCTTCGACC GGCCGCAGAT CGCGATCGCC
AACACCGCCT CGGACCTGAC GCCGTGCAAC GCGCACCTCA CCGAGGTCGC GGCGTCCGTG
CGCAACGGCG TCCTCGAGGC CGGCGGCGTC CCGCTGGAGC TGCCCGTGGT GTCCCTCGGT
GAGACGCAGG TCCGGCCCAC GGCGATGCTC TGGCGCAACA TGGCCGCGAT GGCCACCGAG
GAGATGCTCC GGGCCAACCC GGTCGACGGC GTCGTGCTGC TCGGCGGCTG CGACAAGACC
ATCCCGTCGC TGCTCATGGC CGCGGCCTCG GTGGACCTGC CCGCCGTCGT CGTCCCCGGT
GGGCCGATGC TGACCGGCAC CTTCCGCGGC GTACCGCTGG GCTGCGGCAC CGACGTGTGG
CGGCTGAGCG AGGAGGTCCG CGCCGGCACC CTCTCGCAGG AGGCGTTCAC CCGGTCGGAG
TCGTCGATGA TCCGCAGCCG GGGGCACTGC AACACGATGG GCACCGCCTC GACCATGGCG
CTGGTCGCCG AGGCGCTGGG CACCGTCGTC CCGGGCGTCG CCGGCACGCC TGCTCCCGAC
AGCCGGCTGC TGGAGGCCGC GCACGGCACC GGCCGGCTGG CCGTGGAGAT GATCACCGCC
GACCGGCGGC CGAGCACCTT CCTCACCAGG GCCTCCTTCA CCAACGCGAT CGTCGCACTC
GCCGCCATCG GCGGGTCGAC CAACGCCGTC GTCCACCTGC TGGCCATCGC CGGCCGGCTC
GGCATCGACC TCACGCTCGA CGACTTCGAC CGGATCGGCT CGTCCGTGCC CGTGCTGGTC
GACCTGCAGC CCGCCGGCCG CTTCCTCATG GAGGACTTCC ACCGGGCCGG CGGCCTGCTC
GCGGTCCTGC GCGAGGTGCG CGACCTGCTC GACCCGACCG CGCTCACCGT CACCGGCAAG
CCGCTCGTCG ACTCCCTGGA GGACGCGCCG ATCTGGGATC CCGAGGTCAT CCGCACCCGT
GCCGAACCCC TGGTCGCCGA GGGCGGCATC GCCGTGCTGC GCGGCAACCT CGCCCCGACC
GGTGCGGTGA TCAAGCCGGC CGCCGCCTCG CCGCACCTGC TGCGGCACCG GGGCCGGGCG
GTGGTGTTCG ACTCGATCGA GGACTTCCAC GCCCGCATCG ACGACCCCGA CCTCGACGTC
GACGCCGACT CCGTCCTCGT GCTCCGCGGC TGCGGCCCGA GGGGCTACCC CGGCATGCCC
GAGGTGTCGA ACATGCCGCT GCCGAAGAAG CTGCTGCAGC AGGGCGTCCG GGACATGGTC
CGGGTCTGCG ACGGGCGGAT GAGCGGCACC GCCTACGGCA CCGTCGTCCT GCACGTCACC
CCCGAGGCCG CCGCCGGCGG CCCGCTGGCC CTGGTCCGGA CCGGTGACGT GGTCAGCCTC
GACGTCGCGG CCCGCCGCAT CGACGTCGAG GTGCCGGACG ACGAGCTGGC CCGGCGCGCA
CCGGACGCGG CCACCGTGGC CGCCTTCGCC GACCCGCGAC GCGGGTGGGA GCGCCTCTAC
GTCGACCACG TGCTGCAGGC CGACACCGGC GCCGACCTCG ACTTCCTGCT CGGCTCCAGC
GGCTCGGCCG TCAGCCGCGA GTCGCACTGA
|
|---|
| Protein sequence | MTLRSAQWYA GDARNAYIHR AWMRRGVPGD AFDRPQIAIA NTASDLTPCN AHLTEVAASV
RNGVLEAGGV PLELPVVSLG ETQVRPTAML WRNMAAMATE EMLRANPVDG VVLLGGCDKT
IPSLLMAAAS VDLPAVVVPG GPMLTGTFRG VPLGCGTDVW RLSEEVRAGT LSQEAFTRSE
SSMIRSRGHC NTMGTASTMA LVAEALGTVV PGVAGTPAPD SRLLEAAHGT GRLAVEMITA
DRRPSTFLTR ASFTNAIVAL AAIGGSTNAV VHLLAIAGRL GIDLTLDDFD RIGSSVPVLV
DLQPAGRFLM EDFHRAGGLL AVLREVRDLL DPTALTVTGK PLVDSLEDAP IWDPEVIRTR
AEPLVAEGGI AVLRGNLAPT GAVIKPAAAS PHLLRHRGRA VVFDSIEDFH ARIDDPDLDV
DADSVLVLRG CGPRGYPGMP EVSNMPLPKK LLQQGVRDMV RVCDGRMSGT AYGTVVLHVT
PEAAAGGPLA LVRTGDVVSL DVAARRIDVE VPDDELARRA PDAATVAAFA DPRRGWERLY
VDHVLQADTG ADLDFLLGSS GSAVSRESH
|
|---|
| |