Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1876 |
Symbol | |
ID | 8753547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 1947895 |
End bp | 1948557 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | TrkA-N domain protein |
Protein accession | YP_003408950 |
Protein GI | 284990396 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.416785 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGGGTCG CCATCGTGGG CGCGGGCGCT GTCGGGCGCT CGATCGCCGG GGAGCTGCTC TCCAACGGCC ACGCTGTGAT GCTCATCGAG AAGGACGGCC GCAAGGTCCG CACCCGGGCG GTGCCCGGCG CCGAGTGGGT GCAGGCCGAC GCGTGCGAGG TCTCCTCCCT GGAGGAGGCG CAGCTGGCCA CCTGCGACGT CGTCGTGGCC GCCACCGGCG ACGACAAGGC CAACCTCGTC GTCTCGCTGC TGGCCAAGAC CGAGTTCGCG GTCAACCGGG TCGTCGCCCG GGTCAAGGAC CCGCGCAACG AGTGGCTCTA CACCGAGGCC TGGGGCGTCG ACGTCGCCGT GTCCACGCCG CGGGTGCTGG CCGCGCTGGT CGAGGAGGCG GTGACCGTCG GCGACGTCGT CCGGCTGATG AGCTTCCGCA AGGGCGCGGC CAACCTGGTC GAGATCACCC TCGACGAGGA CACCCCCTGG GCGGGCAAGC CACTGCGCGA GGTGCCGCTG CCGCGGGAGA CGGTGCTGAC CGCCGTCCTG CGCGGCGACC GGGTGATCAC CCCGACCCCC GACGAGCCGC TCGAGGTCGG CGACGAGCTG CTGTTCGTCA CCCACGCCGA TGTCGAGGAG CAGCTGCAGC AGGTGCTGTC CCCCGCCCCG TGA
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Protein sequence | MRVAIVGAGA VGRSIAGELL SNGHAVMLIE KDGRKVRTRA VPGAEWVQAD ACEVSSLEEA QLATCDVVVA ATGDDKANLV VSLLAKTEFA VNRVVARVKD PRNEWLYTEA WGVDVAVSTP RVLAALVEEA VTVGDVVRLM SFRKGAANLV EITLDEDTPW AGKPLREVPL PRETVLTAVL RGDRVITPTP DEPLEVGDEL LFVTHADVEE QLQQVLSPAP
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