Gene Gobs_1709 details

Gene Information

• Locus tag: Gobs_1709
• ID: 8753380
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geodermatophilus obscurus DSM 43160
• Kingdom: Bacteria
• Replicon accession: NC_013757
• Strand: +
• Start bp: 1770444
• End bp: 1772537
• Gene Length: 2094 bp
• Protein Length: 697 aa
• Translation table: 11
• GC content: 70%
• Product: choline/carnitine/betaine transporter
• Protein accession: YP_003408794
• Protein GI: 284990240

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.227681
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGGAAAC GAGCGGCCCC CGCGGAGGCC ACGACCGACC CCGTCCCACC GGCCCGGATC 
AAGGGTCCCG TCTTCTACGG CTCGGCGATC GGCGTCCTGC TGATCGCCGG TTGGGCGATG 
GTCTCCCCGA CGGCGGCTGC GGAGACGATC GGCACGCTGG TGGGCTGGAC GTCGGAGTGG 
TTCGGCTGGT TCTACATCCT GTTCGCGACC GCCGTCCTGG TCTTCGTGCT CTTCCTCGGC 
ATCTCCCGCT ACGGCCGTAC CAAGCTCGGG CCCGAGCACT CGACGCCGCA GTACAGCACC 
TTCGCCTGGG CGTCGATGCT CTTCGCCGCC GGCATCGGCA CCGACCTGAT GTTCTTCGCG 
GTCGCCGAGC CGGTGACGCA GTACCTCGCG CCGCCGGTCG GCGAGGGGGA GACCGTGGCG 
GCGGCGCGGG AGGCGACCGT CTGGACGCTG TTCCACTACG GCCTCACCGG GTGGGGCATG 
TACGCGGTGA TGGGTATGGC GCTGGCCTAC TTCTCCTACC GCCGTAACCT GCCGCTGGCC 
ATCCGGTCCG CGCTGTACCC CGTCCTCGGC AAGCGCGTCC AGGGCCCCCT GGGTCACGGC 
GTGGACATCG CCGCGGTCCT GGGCACCATC TTCGGGGTCG CCACGTCGCT GGGCATCGGC 
GTCGTTCAGC TCAACTTCGG CCTGGAGGTG CTCTTCGGCA TCCCCGAGGG ACGCGCGGCG 
CAGATCGGGC TGATCGTCCT GGCCGTCGCG GCGGCCACCG TGTCCGCGGT GAGCGGCGTG 
GACCGGGGGA TCAAGCGGCT CTCGCAGCTC AACGTGCTGC TGGCCATCGG CCTGGCCGTG 
TTCGTGCTCC TCGCAGGGAA GACGACCTTC CTCCTCAACG GGCTGGTGCT CAACGTCGGC 
GACTTCGTCA GCAGCTTCCC CAGCCTGACG ATGCAGACCT TCGCCTTCGA GCGCCCGGTC 
GAGTGGCTCA ACAGCTGGAC GCTCTTCTTC TGGGCCTGGT GGATCGCCTG GGCTGCCTTC 
GTCGGCCTGT TCCTCGCCCG CATCTCCCGC GGGCGGACGA TCCGCCAGTT CGTGGTCGGG 
ACGATGGTCA TCCCGTTCAG CTACATCGTC ATGTGGATCT CGATCTTCGG GAACAGCGCC 
ATCGAACGCA TCCGGGACGG GGACGCTGCG TTCGGGGAGC TGGCCATGAA CACCCCCGAG 
CAAGGCTTCT ACACGCTGCT GATGGAGTAC CCGGCCTTCC CCTTCATCGG CGCGGTCGCG 
ACCTTCGTCG GCCTGCTCTT CTACGTCACG TCGGCCGACT CCGGCGCCCT GGTGATGGCG 
AACCTGTGCT CCCACCTGCG GACGCCGCAG GACGACGGCG GCAAGGGTGT GCGGATCTTC 
TGGGCGGTCG CCACCGGGCT GCTCACCGCG GCGATGCTCA TCGTGGGTGG TGTCCCCGCG 
CTGCAGAACG CCACGATCAT CATGGCGCTG CCCTTCACCT TCGTGATGGT GCTGGTCATG 
GTGGGCCTCT ACAAGGCCCT CCGGGTGGAG GCTCTCCGGG CGACCAGCCA CCACCAGACC 
CTCCCGGGTC GGCTGTCCGG TCGTGCGCTG GGAGCTCCGG ACGGGAACGG CACGCCCGGC 
TGGCGGCGGC GACTGAACCG GGCCATGGCC TTTCCGGGCC AGACCTCGGC GCGGGATCAC 
CTCGACGAGG TGGTGGCGCC GGCTCTGGAG GACGTCGCGG CCGAGTTGCG CGGTGAGGGC 
ATCGAGGCGC AGGCGCGGCG GGCGACCAAC GACACCGGCC AAGGCTGTGT CGAGCTCACC 
GCCGACCTGC GGGGCGACCA CCCGTTCGCC TACCGGATCT GCCTGCGGGC GGTACCGATC 
CCCGGGTACG GACGCCGTGC CCCGGCCGGC GAGCAGACGT ACTCCCGGCT CGAGGTGCAC 
CTCGGTGAGG GAGGGCAGGG CTACGACGTG ATGGGCTACA CCTACTCGCA GCTGATCGAC 
GACGTCCTCG ACCAGTACGA GCGGCACCTG GAGTTCCTGC GCCTGCAGGA GCCGATACCC 
GCGCCCCGCG AGGTCCCCCG CGACCCGGGC CCCCAACAGC GGGTCCCCCA CTGA 

 

Protein sequence

MRKRAAPAEA TTDPVPPARI KGPVFYGSAI GVLLIAGWAM VSPTAAAETI GTLVGWTSEW 
FGWFYILFAT AVLVFVLFLG ISRYGRTKLG PEHSTPQYST FAWASMLFAA GIGTDLMFFA 
VAEPVTQYLA PPVGEGETVA AAREATVWTL FHYGLTGWGM YAVMGMALAY FSYRRNLPLA 
IRSALYPVLG KRVQGPLGHG VDIAAVLGTI FGVATSLGIG VVQLNFGLEV LFGIPEGRAA 
QIGLIVLAVA AATVSAVSGV DRGIKRLSQL NVLLAIGLAV FVLLAGKTTF LLNGLVLNVG 
DFVSSFPSLT MQTFAFERPV EWLNSWTLFF WAWWIAWAAF VGLFLARISR GRTIRQFVVG 
TMVIPFSYIV MWISIFGNSA IERIRDGDAA FGELAMNTPE QGFYTLLMEY PAFPFIGAVA 
TFVGLLFYVT SADSGALVMA NLCSHLRTPQ DDGGKGVRIF WAVATGLLTA AMLIVGGVPA 
LQNATIIMAL PFTFVMVLVM VGLYKALRVE ALRATSHHQT LPGRLSGRAL GAPDGNGTPG 
WRRRLNRAMA FPGQTSARDH LDEVVAPALE DVAAELRGEG IEAQARRATN DTGQGCVELT 
ADLRGDHPFA YRICLRAVPI PGYGRRAPAG EQTYSRLEVH LGEGGQGYDV MGYTYSQLID 
DVLDQYERHL EFLRLQEPIP APREVPRDPG PQQRVPH