| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1216 |
|---|
| Symbol | |
|---|
| ID | 8752878 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 1276511 |
|---|
| End bp | 1277446 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Integrase catalytic region |
|---|
| Protein accession | YP_003408334 |
|---|
| Protein GI | 284989780 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | CTGATCGACT ACATCGACCA GCACCGCCAG GAGTTCGGAG TCGAGCCGAT CTGCCGCGCC
CTCACCGAGG CCGGCACCAA GATCGCTCCG AGCACCTACT ACGCCGCGCG CACCCGGCCG
CCGTCGGACC GGGCGGTCCG CGACGAGCAG CTCAAGCCCG AGATCAGGCG GGTCTTCGAG
GTCAACCTCG GTGTCTACGG AGTCCGCAAG GTCTGGCGGA CGCTGCAGCG TGAAGGCCAC
CGGGTGCCGC GCTGCCAGAT CGAGCGGCTG ATGCGCGAGC TCGGCCTGGC CGGGGTGGTG
CGCGGCAAGG TCCAGCGGAC CACCGTTCCG GCCGCGACGG TCGACGCCCG CCCCGATGAC
CTGGTGCAGC GCGTCTTCCG GTCCTCGGCG CCGAACCGGC TGTGGGTCGC CGACCTGACC
TACGTCGCGA CCTGGTCGGG CTGGGTGTAC GTCGCCTTCG TCATGGACGT CTTTTCCCGC
CGCATCGTCG GCTGGCAGGC CTCCACTTCG CTGCGCACCG ATCTGGCCCT CGACGCCCTC
GAGCAGGGCC TGTGGACCCG AGCCCGGGAC GAGCAGGAGG TCAGTGGCCT GGTCCATCAC
TCCGACCGCG GCGTGCAGTA CGTCGCGATT CGCTACACCG AACGCCTCGA CGCCGCCGGC
GCCGTTCGCT CGGTGGGCAG CAAGGGCGAC TCCTACGACA ACGCCGCCGC CGAGTCCCTC
ATCGGCCTCT ACAAGACCGA GCTCATCCGC CGCCGCGGCC CGTGGCGCGG CCTCGACGAT
GTCGAGCTGG CCACCCTGGA GTACGTCGAC TGGTTCAACC ACCGCCGGCT GCACGGCGCC
TGCGGCGACA TCCCACCGGT CGAGTTCGAG GACAACTACT ACCGTTCGAT CGCCGGCCTT
ACCGAGGACT CCCCGGCAGA ACCGAGCCTC CACTGA
|
|---|
| Protein sequence | MIDYIDQHRQ EFGVEPICRA LTEAGTKIAP STYYAARTRP PSDRAVRDEQ LKPEIRRVFE
VNLGVYGVRK VWRTLQREGH RVPRCQIERL MRELGLAGVV RGKVQRTTVP AATVDARPDD
LVQRVFRSSA PNRLWVADLT YVATWSGWVY VAFVMDVFSR RIVGWQASTS LRTDLALDAL
EQGLWTRARD EQEVSGLVHH SDRGVQYVAI RYTERLDAAG AVRSVGSKGD SYDNAAAESL
IGLYKTELIR RRGPWRGLDD VELATLEYVD WFNHRRLHGA CGDIPPVEFE DNYYRSIAGL
TEDSPAEPSL H
|
|---|
| |