| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1053 |
|---|
| Symbol | |
|---|
| ID | 8752714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | - |
|---|
| Start bp | 1112756 |
|---|
| End bp | 1114702 |
|---|
| Gene Length | 1947 bp |
|---|
| Protein Length | 648 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | succinate dehydrogenase or fumarate reductase, flavoprotein subunit |
|---|
| Protein accession | YP_003408183 |
|---|
| Protein GI | 284989629 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCG ATCTCTTCTC CGTCGGCGAC CCGATCGCCG ACACCAAGGC ACCCCGGGAC
GTGCCGATCG GCGAGCGGTG GAGCACCCGC CGGTTCCGGG CCCGCCTGGT CAACCCGGCC
AACCGCCGCA AGCTGACCGT CATCGTCGTC GGCACCGGCC TGGCCGGCGG TTCGGCCGCC
GCGACGCTCG GCGAGGCCGG CTACAAGGTC AAGAACTTCT GGTTCCACGA CAGCCCGCGC
CGGGCACACA GCGTCGCCGC ACAGGGCGGC ATCAACGCCG CGAAGAACTA CCGCAACGAC
GGCGACAGCG TGCACCGGCT GTTCTACGAC ACCGTCAAGG GCGGCGACTT CCGGTCCCGC
GAGGACAACG TGCACCGCCT CGCCGAGGTC AGCGTCAGCA TCATCGACCA GTGCGTCGCG
CAGGGAGTCC CCTTCGCCCG CGAGTACGGC GGCCTGCTCG ACAACCGCTC CTTCGGCGGT
GCGCAGGTGT CGCGCACCTT CTACGCCCGC GGGCAGACCG GTCAGCAGCT GCTCTACGGC
GCCTACCAGG CGCTGGAGCG GCAGATGGCG GCCGGCACCG TCGAGCAGTT CGCCCGGCAC
GAGATGCTCG ACCTGATCAT CGTCGACGGC CGGGCCCGGG GCATCGTGGC GCGCAACCTC
ATCACCGGCG AGGTCAGCAC CCACTTCGCC GACGCCGTCG TCCTGGCCAC CGGCGGGTAC
AGCAACGTCT TCTACCTGTC CACGAACGCC AAGGGCTCCA ACGCCACGGC GATCTGGCGG
GCGCACAAGC GGGGCGCGTA CTTCGCCAAC CCCTGCTACA CGCAGATCCA CCCGACCTGC
ATCCCGGTCA AGGGCGACTA CCAGTCCAAG CTCACGCTGA TGAGCGAGTC GCTGCGCAAC
GACGGCCGCG TGTGGGTGCC CAAGGAGCGC GGCGACAGCC GCGACCCACG CGAGATCCCC
GAGTCCGAGC GCGACTACTA CCTCGAGCGG ATCTACCCCG CGTTCGGCAA CCTGGTGCCC
CGCGACATCG CCTCGCGCCA GGCGAAGAAC GTCTGCGACG AGGGCCGCGG CGTGGGCCCG
GGCGGGCTGG GCGTCTACCT GGACTTCGGC GACGCGATGG AGCGGCTGGG CCGGCCGGCC
ATCGAGGCCA AGTACGGCAA CCTGTTCGAC ATGTACGCCC AGATCACGGG CGAGGACCCC
TACGAGACGC CGATGCGGAT CTACCCGGCG GTCCACTACA CGATGGGCGG GTTGTGGGTC
GACTACGACC TGCAGTCGAC CATCCCCGGC ATGTTCGTGA TCGGCGAGGC CAACTTCTCC
GACCACGGCG CGAACCGCCT GGGCGCCAGC GCGCTGATGC AGGGCCTGGC CGACGGCTAC
TTCGTGCTGC CGAACACCAT CAACGACTAC CTGGCCGACG GCCCCTTCGA GAAGGTCGAC
GACAGCCACC CGGCCGTCGC CGAGGCGCTG CAGGACGTGC AGGGCAGGGT GCAGAAGCTG
CTGTCGATCA ACGGCAGCCG CACCCCCGCC TCGTTCCACC GCGAGCTCGG CCGGCTGATG
TGGGACCTGT GCGGCATGGA GCGCTCGGAG GAGGGTCTGC GCAAGGCCCT GGACCGGATT
CCCGAGATCC GCCAGGAGTT CTGGACGAAC CTCAAGGTCT CCGGCGACCT GGACACGATC
AACCCGACCC TGGAGCACGC CGGCCGCGTC GCCGACTTCA TCGACCTCGC CGAGCTGATG
TGCGTCGACG CCCTCCACCG CGCCGAGAGC TGTGGCGGGC ACTTCCGGGC CGAGAGCCAG
ACCCCCGAGG GCGAGGCGCT GCGCGACGAC GAGAACTTCG CCTACGTGGC CGCGTGGGAG
TGGACGCCGG AGGGCGCTCC CCCCGTCCTG CACCGCGAAG CCCTCGAGTA CGAGTACGTC
CACCTCGCCC AGCGCAGCTA CAAGTGA
|
|---|
| Protein sequence | MSLDLFSVGD PIADTKAPRD VPIGERWSTR RFRARLVNPA NRRKLTVIVV GTGLAGGSAA
ATLGEAGYKV KNFWFHDSPR RAHSVAAQGG INAAKNYRND GDSVHRLFYD TVKGGDFRSR
EDNVHRLAEV SVSIIDQCVA QGVPFAREYG GLLDNRSFGG AQVSRTFYAR GQTGQQLLYG
AYQALERQMA AGTVEQFARH EMLDLIIVDG RARGIVARNL ITGEVSTHFA DAVVLATGGY
SNVFYLSTNA KGSNATAIWR AHKRGAYFAN PCYTQIHPTC IPVKGDYQSK LTLMSESLRN
DGRVWVPKER GDSRDPREIP ESERDYYLER IYPAFGNLVP RDIASRQAKN VCDEGRGVGP
GGLGVYLDFG DAMERLGRPA IEAKYGNLFD MYAQITGEDP YETPMRIYPA VHYTMGGLWV
DYDLQSTIPG MFVIGEANFS DHGANRLGAS ALMQGLADGY FVLPNTINDY LADGPFEKVD
DSHPAVAEAL QDVQGRVQKL LSINGSRTPA SFHRELGRLM WDLCGMERSE EGLRKALDRI
PEIRQEFWTN LKVSGDLDTI NPTLEHAGRV ADFIDLAELM CVDALHRAES CGGHFRAESQ
TPEGEALRDD ENFAYVAAWE WTPEGAPPVL HREALEYEYV HLAQRSYK
|
|---|
| |