Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0978 |
Symbol | |
ID | 8752639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 1039275 |
End bp | 1040858 |
Gene Length | 1584 bp |
Protein Length | 527 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | |
Product | flagellar M-ring protein FliF |
Protein accession | YP_003408110 |
Protein GI | 284989556 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.102842 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCTG CCCTCGCCGG GCCGGTGGAG CGGATCCGGT CCGCGCTCGC CACGATCAGC CTCGGCCAGA AGGTCGTCAT CGGCCTGCTC ACCGCGGGGC TGCTCCTCGG CGGCTTCTTC TTCTACCGGT GGATCACCGC CCCCACCTAC GCCCCCCTGT TCTCGAACCT GGCCTCGACC GACGCGTCGG CGATCGTCGA CGAGCTCAAC GCAGCCGGCG CCGCCTACGA GCTCGCCGAC GGCGGCGGCA CGATCATGGT GCCGAACGAG CAGGTGTACG ACCTGCGACT GTCGATGAGC GGCAAGGGCC TGCCCGCCGG CAACGACACC GGGTACGCGC TGCTCGACGA GCAGGGCATC ACGACCAGCG AGTTCCAGCA GCAGGTCACC TACCAGCGCG CCCTGCAGGA CGAGCTGGCC CGGACCCTGG AGTCGCTGGA GGGCGTGCGC ACCGCCGTGG TGCACCTGGC CCTCCCGGAG GAGGAGGTGT TCGCCTCCGA CGAGGCCGAG CCCACCGCCT CGGTGCTGCT TGACCTGGCA CCGGGTACCG GGCTGGACAG CGGTCAGGTC CAGGCGGTGA CCAATCTGGT CTCCTCCAGC ATCGAGGGCA TGGACCCCGA GCAGGTCACC GTCGCCGACG CCACCGGCGC GGTGCTCTCG GCCCCCGGCC AGGGCGTCAC CTCGGCCGCC GGCGACGCCC GCTCGCAGCT GGAGCAGGAC TACGAGGCCC GGTTGGCGTC CAACGCGCAG GCCGTGCTCG ACCCCATCCT CGGCCCCGGC CGCGCCAAGG TGTCGGTCCG GGCCGACGTC GACCTCGACC AGCGCAGCAC CACCTCGGAG ACGCACACCT ACGAGGAGGG CACCCCGCCG ATCTCGGAGA GCACGACGAC CGAGGAGTAC ACCGGCAACG GCGCCGCCGT GGGCGGCATC CTCGGCCCGG AGAACCAGGC CGACGCCGGG GGCGGGACCG GGGACTCCGC GTACAACAAG GAGTCCACGA CCGCGAACAA CGCCGTCGGC ACGACCGTGG AGACCGTGGA GGGCGCACCC GGCAGGATCA ACCGGCTCAC CGTCTCCGTC GTCATGGACG AGGCCGTCGC CGGCAACCTC AACCAGGCGC AGATCCAGGC CCTGGTCGGC AACGCCATCG GCCTCGACGT CGCGCGCGGC GACGACATCA CCGTCGCCTC GATGGCCTTC GACACCACCG CCGCCGACCG GGCGGCCGAG GAGCTCGCGG CGGCCGAGGA GGCCGAGCGG CAGGCCCAGC TGTGGTCGAT GGTCAAGACC GGCGGCATCG CCCTGCTCGT GCTCGTCGTC TGGCTGCGCT CCCGCCGTGG TCGGGAGGAC GAGGAGGACG AGGACTACGA GGCGCTGGAG CTCGCCGACG ACGTGATGGC CGAGCTGGAC CGCATCCGCA TCGAGAGCAC GCGGGCGGTG CCGGTCGTCG ACAACGCGGC GCTGGAGATG GAGGCGGCCG AGCGGGCCCG GGTCCGCGGC GAGATCGCCA CGATGGTCAG TGAGAAACCC GACGAGGTGG CCGCGATGCT TCGTGGCTGG CTGAGCGAGA GCGGTGTGAA ATGA
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Protein sequence | MPAALAGPVE RIRSALATIS LGQKVVIGLL TAGLLLGGFF FYRWITAPTY APLFSNLAST DASAIVDELN AAGAAYELAD GGGTIMVPNE QVYDLRLSMS GKGLPAGNDT GYALLDEQGI TTSEFQQQVT YQRALQDELA RTLESLEGVR TAVVHLALPE EEVFASDEAE PTASVLLDLA PGTGLDSGQV QAVTNLVSSS IEGMDPEQVT VADATGAVLS APGQGVTSAA GDARSQLEQD YEARLASNAQ AVLDPILGPG RAKVSVRADV DLDQRSTTSE THTYEEGTPP ISESTTTEEY TGNGAAVGGI LGPENQADAG GGTGDSAYNK ESTTANNAVG TTVETVEGAP GRINRLTVSV VMDEAVAGNL NQAQIQALVG NAIGLDVARG DDITVASMAF DTTAADRAAE ELAAAEEAER QAQLWSMVKT GGIALLVLVV WLRSRRGRED EEDEDYEALE LADDVMAELD RIRIESTRAV PVVDNAALEM EAAERARVRG EIATMVSEKP DEVAAMLRGW LSESGVK
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