| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0634 |
|---|
| Symbol | |
|---|
| ID | 8752290 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 675853 |
|---|
| End bp | 677529 |
|---|
| Gene Length | 1677 bp |
|---|
| Protein Length | 558 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | |
|---|
| Product | L-aspartate oxidase |
|---|
| Protein accession | YP_003407783 |
|---|
| Protein GI | 284989229 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAGCACGC TGGCGGCCGG GCGCGTCACC GGGCTGCCGG TGCGGCTGAC CGCGCCGGCG
CCCGGCTGGG AGCTCGTGGC CGACGTCTGC GTCGTCGGCT CCGGCATCGC CGGGCTGTGC
GTCGCGCTGC ACGCCCGGGC GGCCGGGCTG TCGGTCGCCG TCGTCACCAA GGTCCGGGTG
GACGACGGGT CGACCCGCTG GGCGCAGGGC GGCATCGCCG CCGTGCTCGA CCCCGCCGAC
AGCCCTGCGG CGCACGCCCG CGACACCGAG GTCGCCGGGG TGGGGCTGTG CGAGCCCGCG
GCGGTCTCCG TGCTCGTGCA CGAGGGCCCC GAGCGGCTGC GCCAGCTGAT CGGCTGGGGC
GCCGCCTTCG ACCGCAACCC CGCCGGCACG CTGCTGCTCA CCCGCGAGGG CGGGCACTCC
GCCGACCGGA TCGTGCACGC CGGCGGCGAC GCCACGGGCT CGGAGGTGCA GCGCGCGCTG
CAGGACGCCG TCCGGGCCGA CCCCGGGGTC ACGCTCGTCG AGCACGCGAT GGTGCTCGAC
CTGCTCACCG ACGCCGCCGG CCGCGCCGCC GGGGTCACCC TGCACGTGCT GGGCGAGGGC
AGCGCCGACG GCGTCGGCGC GGTACGCGCC CGAGCGGTCG TGCTCGCCAC CGGCGGCATG
GGGCAGGTCT ACGCCGCGAC CACCAACCCG CCGGTCTCCA CCGGGGACGG CGTGGCCCTC
GGGCTGCGCG CCGGAGCCGT CGCCACCGAC CTCGAGTTCG TGCAGTTCCA CCCGACCTCG
CTCTACCGAG GCCCGGGTGC GCGCGGCCAG CAGCCGCTGG TCAGCGAGGC ACTGCGCGGC
GAGGGCGCGG TGCTGCGCGA CGGGTCAGGG GAGCGGTTCA TGGTCGGCGT CCACCCGCTG
GCCGAGCTGG CCCCCCGCGA CGTCGTCGCC AAGGCCGTCA CCCGGGTCCA GCTGCGCGAC
GGCGTCGACC ACGTGGAGCT CGACGCGCGC GGCGTCCCCG ACCTCGCCCG GCGGTTCCCG
ACGATCGTGG CGAGCTGCCG CGCGGCCGGC ATCGACCCGG TCACCGAGCT GATCCCGGTC
ACCCCGGCGG CTCACTACGC CTCGGGTGGC CTGGTCACCG ACCTGGCCGG GCGGACGACG
GTGCCCGGCC TCTACGCCTG CGGGGAGGTG GCCTGCACCG GCGTGCACGG GGCCAACCGG
CTGGCGTCGA ACTCGCTGCT CGAAGGGCTG GTCTTCGCCG CGCGCATCGG CGCGGAGCTG
GCCGAGCGGC TGCCGCCGTC GTCGCCCCTC GGGCCGCAGG ACACCGCGCC GTCCGGGCTG
CTCGGCCCCG AGGGCCGCCG TGCGGTCACC GAGACGATGT CGGCCCGCGT CGGCGCGCTG
CGCGGCGGGG CGGGGCTGGC CGAGGCGACC GGCCGGCTGG CCGCCCTGGC CGCCGGGCTG
GACACGGACG CAGCCCCCGG CGTGGCCGGC TGGGAGGCCA CCGACCTGCT CACGGTCGCC
ACTGCGCTCG CCACCGCGGC CGCGGCCCGG GAGGAGACCC GCGGCTGCCA CTGGCGCGAG
GACCACCCCG GGACCGAGGA GGACTGGCAG GTGCACCTGG ACGTGCGGCT CGGCGAGGAG
GGCTCCCTGC AGGTGACCCG CCGCCCGGTG GGGACGCCGG TGGTGCAGCC GTGGTGA
|
|---|
| Protein sequence | MSTLAAGRVT GLPVRLTAPA PGWELVADVC VVGSGIAGLC VALHARAAGL SVAVVTKVRV
DDGSTRWAQG GIAAVLDPAD SPAAHARDTE VAGVGLCEPA AVSVLVHEGP ERLRQLIGWG
AAFDRNPAGT LLLTREGGHS ADRIVHAGGD ATGSEVQRAL QDAVRADPGV TLVEHAMVLD
LLTDAAGRAA GVTLHVLGEG SADGVGAVRA RAVVLATGGM GQVYAATTNP PVSTGDGVAL
GLRAGAVATD LEFVQFHPTS LYRGPGARGQ QPLVSEALRG EGAVLRDGSG ERFMVGVHPL
AELAPRDVVA KAVTRVQLRD GVDHVELDAR GVPDLARRFP TIVASCRAAG IDPVTELIPV
TPAAHYASGG LVTDLAGRTT VPGLYACGEV ACTGVHGANR LASNSLLEGL VFAARIGAEL
AERLPPSSPL GPQDTAPSGL LGPEGRRAVT ETMSARVGAL RGGAGLAEAT GRLAALAAGL
DTDAAPGVAG WEATDLLTVA TALATAAAAR EETRGCHWRE DHPGTEEDWQ VHLDVRLGEE
GSLQVTRRPV GTPVVQPW
|
|---|
| |