| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_0532 |
|---|
| Symbol | |
|---|
| ID | 8752187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 581120 |
|---|
| End bp | 581920 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | Extradiol ring-cleavage dioxygenase class III protein subunit B |
|---|
| Protein accession | YP_003407685 |
|---|
| Protein GI | 284989131 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACGGTGA TGCCGGCTGC GTTCCTCGGC CATGGCAACC CGATGAACGC CATCGAGGAC
AACCGCTACA CGCGGGCCTG GCGCGTGTTC GGCCAGGCGG TGCCACGGCC GCGGGCGATC
CTCGTCGTCT CGGCGCACTG GTACCTGCAC GCCACCGCGA TGACCGCGAT GCCCCGGCCG
CGCACCATCC ACGACTTCTA CGGCTTCCCA CGCGAGCTCT ACGACGTCGA CTACGGGGCA
CCCGGACTGC CCGAGCTGTA CGAGGAGGTC GCCGACGTCG TCCACCCGAC GTGGGTCGGC
GCCGACCTCG ACAGCTGGGG CATCGACCAC GGTGCCTGGT CGGTGCTGCG GCACGCCTTC
CCGGACGCCG ACGTGCCGGT GGTGCAGCTG TCCGTCAACG CGCTCGAGCC GGCCGACCAC
CACCTGCGGC TGGGCGCCGC GCTGGCGCCG CTGCGGGAGG ACGGCGTGCT GGTGATCGGC
AGCGGCAACG TCGTCCACAA CCTGGCCGCG GTGAGCCGCA CGATGCCCGA CAGCGGGTAC
GACTGGGCGC ACCGCTTCGA CGAGCGGGTG CGCGAGCTGA TGCTGGAGCG GCCGACCGAG
GTCGCCGCCC TCGACGGGCA CCCGGACGCC ACCCTCGCCG TCCCCACCCC CGAGCACCTC
CTGCCGCTGC TCTACGTCGC CGGGATCGCG GGGGCGACCG GCACGACGGC GGAGCTACTG
GTCGACGGGT TCACCGACGG CTCGCTGTCG ATGGCGTCCT ATACCGTCGG CATGACGCCC
CCCGTCGTCG ACGTCGGCTG A
|
|---|
| Protein sequence | MTVMPAAFLG HGNPMNAIED NRYTRAWRVF GQAVPRPRAI LVVSAHWYLH ATAMTAMPRP
RTIHDFYGFP RELYDVDYGA PGLPELYEEV ADVVHPTWVG ADLDSWGIDH GAWSVLRHAF
PDADVPVVQL SVNALEPADH HLRLGAALAP LREDGVLVIG SGNVVHNLAA VSRTMPDSGY
DWAHRFDERV RELMLERPTE VAALDGHPDA TLAVPTPEHL LPLLYVAGIA GATGTTAELL
VDGFTDGSLS MASYTVGMTP PVVDVG
|
|---|
| |