Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0392 |
Symbol | |
ID | 8752042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 422549 |
End bp | 424624 |
Gene Length | 2076 bp |
Protein Length | 691 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | glycoside hydrolase family 16 |
Protein accession | YP_003407549 |
Protein GI | 284988995 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCGTCGA GGAAACGCCT CCTCGTCCTG TCCGCAGTGG TTGTCGCCGC CTTCGTGGTC GCCGTGGTGG TCGTCGTCCT CCGCACGCCC GCCGCGCCGA GCGTCACTGC ATCGTCGGGC ACCGACCCCG CCGACCTGGT CGGCAACGAG GATCGCGACG TCGGCTGGCG CACCGATGAG GAGACAGTCG GCGCCTGGGT CGAGCTTGCC TATCCCGAGC CGACGGCCGT GGACCGCGTC CAGCTGCTCG GCCCCGGCGG TGGGGACACC GGTGCCACCA GCGCCCTCCT GACCTTCGAC GGCGGCGGGG AGCTCCTCGT GACGACGGAC GACGCGGGCG ACGCATCCGT CGACTTCCCT GAGCGAACCG TGTCCTGGGT GCGGGTCACC GTCGCCGGGG TGCCCGACGG GGCGACGTCG GTGGCGCTGG CCGGTCTCAC CGTCGACGGA TCGGCGGACG ACCCGCCGCG GCGGGGGAGC CGAGGACCGG TGACCGCGGA GACCTCCAGC GAGGGCAGCG CTCCGGCGGC GGCTCTGTCG GATGGCACCC CGGCCGAGGG TGACACCGGG GACGAGTGGA CGCCCGCGGA CGGTGACGAC CGGCCGTGGG CCCGGCTGAC GTGGGACACA CCTCGGGAGG TGGCCAGCGT GCAGGTCTTC GGGCCGTCGT CGGCCGGCGA CGACGCGGAC GTGCCGTTGA GTGGCGTCCT GCGGTTCGAC GACGGCAGTT CCGTCCGGGT CTCTGCAATC GCGTCCGGAG GGCACGAGGG GACCACCATC GCCTTCGCCC CGCGGATGGC CACCGCGGTA CGGCTGGAGC TCGACGCGGC GGCGGGACTG CGCGAGTTCG CGGTGTACGA CGCAGGCACG ACCCCACCGC GCTGGCCGCA GGACGGCGAC ACGTACGCCG TGTCACCGCA GCCCGCGGGG ACGTGTGAGG CGTCGTCGGA TCCCTTCGTC CAGCCGGAGC CCGGCCGGCT GACCCTCGTC TGCCCCTCCC CGGGCTCTGT GGTGGACGGC CGGACCGACG TCGTCGTGGC GGCCGACCCC GGGACGGCCG TCGAGGCCCG CGTGTGGACC GGGGGACCGG CCACCGGGAC GAACGCGGTC GACGTCGTGG CGACAGCGGT GTCCGACGGC AACGGCCGTG CGCTCCTCAC ACTGGACACC GCCGCGGCGC CGCGGGGGCC CCTCACCATC CGGGTGGACC GGGCGTCCGC CATCCCCGAC CCGGCGACCG TCGGCGCAGG CGCACCGGTG TACGTACAGC TCTACAACCG AGCGGGGCAG GACCCGGCCA CGCCCGACAC CGCGCCGGAG GGCATGACCC TGCAGTGGGC CGAGGAGTTC ACCGGCCCGC TGTCGGTCAG CGCCACCGGC GCCGGGGCCG ACTACGCGGC ACTCAAACCC GATGCCTCGA GCAGCGGCCA GTTCGGGGAC GCACCGTTCG CCGACCCAGC TTCCGAGGCC GGGACGCTCA CCACCGTCGA CGACGAGTAC CTGCGGATTC GCACCCAGCC CATCCCGTCC GCCAGCAGCC GCGACGGCAC CGCAAACGTC GCCGGCCTGC TCGCCTCCAC CGACGTCGAC GGGGCCGGCT TCGCGGCCCA GTACGGCTAC TTCGAGGCCC GGATGCTGGG CGCACCGGGA CCTGGGACCT GGCCGGCGTT CTGGATGCTG AACACGGAGA GCGCCGCGCG CCCGAGTCGG ACGGCGGCCG AGGTGGACGT CGTGGAGCTC TATGGGCACA ACACGCTAGG CAGCTGCCAC ACGGTGCACA ACTGGGGTGC CGAGGACGAG GTCGAGTCGG ATGCCGGTGC GCCGTCCTGC CTCGACCGCA ACGACTTCGC CGACTGGGCC GTCGCCTGGC ACACCTACGG CGCGCGGATC ACGCCTGACG CCGTCACCTT CACGATCGAC GGGGAGGTGG TGGCAACAGC CGGCCGGCTG CAGCTGACCT CCGAGCCCTT CTTCTTCTTG CTCAACCTGG CTCTTGGCGG CGGGTGGCCG GTCGACCTGT CGGCGACGGG GGGCATCTCG GACCTGTACG TCGACTGGGT GCGCGTCTAC TCGTGA
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Protein sequence | MPSRKRLLVL SAVVVAAFVV AVVVVVLRTP AAPSVTASSG TDPADLVGNE DRDVGWRTDE ETVGAWVELA YPEPTAVDRV QLLGPGGGDT GATSALLTFD GGGELLVTTD DAGDASVDFP ERTVSWVRVT VAGVPDGATS VALAGLTVDG SADDPPRRGS RGPVTAETSS EGSAPAAALS DGTPAEGDTG DEWTPADGDD RPWARLTWDT PREVASVQVF GPSSAGDDAD VPLSGVLRFD DGSSVRVSAI ASGGHEGTTI AFAPRMATAV RLELDAAAGL REFAVYDAGT TPPRWPQDGD TYAVSPQPAG TCEASSDPFV QPEPGRLTLV CPSPGSVVDG RTDVVVAADP GTAVEARVWT GGPATGTNAV DVVATAVSDG NGRALLTLDT AAAPRGPLTI RVDRASAIPD PATVGAGAPV YVQLYNRAGQ DPATPDTAPE GMTLQWAEEF TGPLSVSATG AGADYAALKP DASSSGQFGD APFADPASEA GTLTTVDDEY LRIRTQPIPS ASSRDGTANV AGLLASTDVD GAGFAAQYGY FEARMLGAPG PGTWPAFWML NTESAARPSR TAAEVDVVEL YGHNTLGSCH TVHNWGAEDE VESDAGAPSC LDRNDFADWA VAWHTYGARI TPDAVTFTID GEVVATAGRL QLTSEPFFFL LNLALGGGWP VDLSATGGIS DLYVDWVRVY S
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