| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3548 |
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| Symbol | |
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| ID | 3739807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3982844 |
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| End bp | 3983815 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637780837 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_386478 |
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| Protein GI | 78224731 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | [TIGR02925] peptidyl-prolyl cis-trans isomerase, EpsD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000000000137747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 60 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCTGA AAAGGAGTTT CAACGTGAAA CGAACAGCGG TTCTGACGAT CCTCTCGGCC
ACCCTCCTGG CGGTCCCGTT CACCGGCTGC AAAGGAAAGA CCGAAACCGG CACTGCCACG
GCCCCCGCCA AGAAGGCCGG GGAAGTGATC GCCGAGGTTA ACGGCGACAC CATCACCACC
GGCGACTTCC AGAAGGAGCT GGAAAACCTT CCCCCCTACC TGAAGCCCAT GGCCGACACT
GCCGAAGGGA AAAAGGAACT CCTCGATACC ATGGTGGTCC GGGAGCTGAT CCTCCAGCAG
GCCAGAAAGG ACGGCCTGGA CAAGAGCCCC GACGTGGCAG CCAAGCTGGA GGAGCTCAAG
AAGCGGGTCG TAGTGGAGGC GTTCCTCAAG AAGAAAGTGG AGGAGCAGGC CAAAGTCTCC
GACGAGGAGA TGAAGAAATT CTACGAAGAA AACAAGGACA AATTCAAGAC CGGTCCCCAG
GTCCACGCGA GCCACATTCT CATGAAGAGC GAGGACGAAG CCCAGAAGGT CCTCAAGGAA
CTCAAAGAAG GGGGGAACTT CGAGGAGCTG GCCAAGAAGC ACTCCATCGA CTCCGCCGCG
GCCAAGGGAG GCGACCTGGG ATGGTTCAGC AAGGGCTCCA TGGTCCCCGA ATTCGAAAAG
GTGGTATTCG GCCTGAAAGA GGGGGAAACC TCCGGCATCG TCAAGACCAA GTTCGGCTAC
CACATTATCA AGCTGACCGG CAAGCGGCCG GCCGGCATCC GTACCTTCGA CGAGGTGAAA
GAGCAGCTCA GGGCAGCCAT CCTCCCCAGC AAGCAGCAGG AAGTCTTCCA GAAGCTCAAG
GATGACATCA AGAAGGGGGC CAAGGTCACC ATCAAGGAGG ACGTCCTCAA GGGAATCGGA
GGCGCCGCCG CGGAAAAGCC GGCACCCGCG GGCCCCGAGA GCACTCCGGC AAAGAAAGCG
GAAACGAAGT AA
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| Protein sequence | MSLKRSFNVK RTAVLTILSA TLLAVPFTGC KGKTETGTAT APAKKAGEVI AEVNGDTITT
GDFQKELENL PPYLKPMADT AEGKKELLDT MVVRELILQQ ARKDGLDKSP DVAAKLEELK
KRVVVEAFLK KKVEEQAKVS DEEMKKFYEE NKDKFKTGPQ VHASHILMKS EDEAQKVLKE
LKEGGNFEEL AKKHSIDSAA AKGGDLGWFS KGSMVPEFEK VVFGLKEGET SGIVKTKFGY
HIIKLTGKRP AGIRTFDEVK EQLRAAILPS KQQEVFQKLK DDIKKGAKVT IKEDVLKGIG
GAAAEKPAPA GPESTPAKKA ETK
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