| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3523 |
|---|
| Symbol | |
|---|
| ID | 3739779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3956194 |
|---|
| End bp | 3956847 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637780809 |
|---|
| Product | isoprenoid biosynthesis protein with amidotransferase-like domain |
|---|
| Protein accession | YP_386453 |
|---|
| Protein GI | 78224706 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TCGGAGTTGT CCTTTCCGGC TGTGGTGTTT ACGACGGTAG TGAGATTCAC
GAGGCGGTTT TTACCCTGCT TGCCATCGAC CGGAACGGGG CAGAGGCGGT ATGCCTGGCG
CCCGACATGG AATTTCGCGA GGTGAACCAT CTCACCTCCC AGGAGACCGG CGCCGTCCGC
AATACCCTCG TGGAGTCGGC CCGGATCGCA CGCGGCAAGA TCAGGAACGT GGCGGAGATT
GCGGCTGCCG ACCTGGATGC CGTCGTCTTT CCCGGCGGTT TCGGGGCGGC AAAGAACCTT
TGCAATTTCG CGGAGAAGGG GGCAGATGCG GCCATCCATC CCGAGGTGGC GCGGCTTATC
CGGGAGATGG CCCTCGCGAA GAAGCCCATT GGCGCCATCT GCATCGCTCC GGCTCTCATC
GCCGCAACCC TCGGCCGTGA CTACAAGCCG AAAGTGACCA TCGGGACCGA CGCCGGCACG
GCGGCAGCAA TTGCCGCTAC GGGGAGCGAG CATGTTGATT GTCCAGTTAC GGAATTTGTG
GTGGACCGGG AGAACAAGAT TGTCACCACC CCCGCCTACA TGCTTGCCAA CCGGATCTCT
GAAGCGGCCG AAGGGATCGA GAAGGCGGTG AAGACGGTCA TCGACATGGC GTGA
|
|---|
| Protein sequence | MKKIGVVLSG CGVYDGSEIH EAVFTLLAID RNGAEAVCLA PDMEFREVNH LTSQETGAVR
NTLVESARIA RGKIRNVAEI AAADLDAVVF PGGFGAAKNL CNFAEKGADA AIHPEVARLI
REMALAKKPI GAICIAPALI AATLGRDYKP KVTIGTDAGT AAAIAATGSE HVDCPVTEFV
VDRENKIVTT PAYMLANRIS EAAEGIEKAV KTVIDMA
|
|---|
| |