| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3522 |
|---|
| Symbol | |
|---|
| ID | 3739778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3955548 |
|---|
| End bp | 3956153 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637780808 |
|---|
| Product | outer membrane protein, putative |
|---|
| Protein accession | YP_386452 |
|---|
| Protein GI | 78224705 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 0.550518 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAT TGGTAACCGT GGCATGGATT GTTGTGGCTG TTGCCGGCCT CAGCGGCACG
GCGCTGGCCG ACAGCATCAA GGGAAAGTTG GGCGTTACGG GGCGGCTCGG TGTTTACCTC
CCTGCCGAGA GTGATTTTGA CGACCGCAAG TTGGAGACCG ACGTCGGGTT CATCGGCGGA
GGCGGGGTGA TCTACGGCAT TACCGATAAC ATAGCGGCCG AGATCGACGT GACGCATACC
GAATTCGGCT CCAACCGCGT TTCGGGACTG GACGAGGGGG ACTTTGAGGT TGTGAACGTC
TCCCTGGGGG GGCAGTATCG ATTCCTGTTG CCCCAATCCA AGTTTGTCCC TTACGCAGGG
GGTGGTCTCG ACATCCTGCT GATCGATTAT ACGCGCCCTT CGGGCACAAA GGCCCATGTG
GACACGGGAG TTGGAGTCCA TGTCAACGGG GGTGTTGATT ATTTCGTCAC CAGACAGCTT
GTGTTGAACG CCGAGGTCAA AGGGGTTATT GCTCCCGAGG TCGACATGAC GGCGGAAGGC
AGACCGGGAA ATTTTGACCC GAGCGGCGTT GCCGGTACCG TGGGTGTAAG ATTTTTCTTC
AATTAG
|
|---|
| Protein sequence | MKRLVTVAWI VVAVAGLSGT ALADSIKGKL GVTGRLGVYL PAESDFDDRK LETDVGFIGG
GGVIYGITDN IAAEIDVTHT EFGSNRVSGL DEGDFEVVNV SLGGQYRFLL PQSKFVPYAG
GGLDILLIDY TRPSGTKAHV DTGVGVHVNG GVDYFVTRQL VLNAEVKGVI APEVDMTAEG
RPGNFDPSGV AGTVGVRFFF N
|
|---|
| |