| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3477 |
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| Symbol | |
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| ID | 3739190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3900064 |
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| End bp | 3904461 |
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| Gene Length | 4398 bp |
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| Protein Length | 1465 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637780765 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_386410 |
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| Protein GI | 78224663 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAAAGG AATCGGCTAC TTTTGCCGAT AAGTTAGCTG TAACTATTTT TTTTAAAGGC
AAGCACATGC GACCCTTGAG CCTGAAATCG AAGATGAGCA TCACGGTCTT TCTCCTGGTG
GCCGTGCTGA TGTCCTCTCT GGCATTCTTC TCCTACGGGT ATTTTGAAGG GGAGTTCAAG
CGGTTGATTT GTGCCCAGCA GTTTACGCTG GTATCGTCCC TGGCCGACGA GGTGGACGAC
GAGCTGGCGA CCAGCAGCGC CCTCCTCCGG GAGACGGCGA AGCGGATGCC TCTGGACGCA
TATGGAGACC CACTCAAGGC CCAGAGATAC CTCGACGGCT GCGCGGAAAC CCTCTCGGTC
TTCGACGACG GCCTCTCCCT CTTCTCTCCG GAGGGAACGC TCATGGCTGC GACCCCCCAT
GAGCCGAACC TCCTGGGAAA GGACTATTCT TACCGCGAAT ACTTCCGCCA GACGGTTGCC
ACCGGCCGCC CCCACATTTC CATCCCTTAC TGCACCACCA GGCAGCACCG GAATCCGGCC
GTCATGTTCA CCGTGCCGCT CTTCGGGACC GATGGAAAGC TTGCCGGTAT CCTGGCCGGG
AGCTTTGACC TGCTGAAGGA CAATTTCCTG GGAAAGATAG AAAAGACCAG GGTCGGCAAG
ACCGGGTATC TCTATACATT CAACGCCGAC AGACGACTCA TTACCCATCC CGACAGTCCG
CGGATACTGG AGACAGTGCC CGTCGGGAAG AACATCGGCT TCGAGAGGGC ACTCCAGGGA
TTCGAGGGGA GCATGGAGAA TGTGACGTCC CGTGGAAACA GGGGGATCAC ATCCTTCAAG
AGGCTCAGGA ACGCCAGTTG GACCATCGCT GCCCACTATC CCGTGGATGA GGCCTACGCC
CCGGTCCATG CTGTGAAAAA GTACTTACTT GCTGCACTCG TGGGGGCGAT TCTTCTGTCG
ATCTTCGTTG TGCGGCTGAC CATGGCGTAC CTGACCGCCC CGCTCCTTCA CTTCACCAGA
CATGTGGCCA ACCTCGGCGA CATGTCGCCG AAAGGGAGGC GTTTCTCCGC TCCGTCGCGG
GACGAGATCG GAACCCTGGC CGAGACCTTC AACGCCATGG TGGCTAGGCT GGAAAAAAAA
GAGGAGGAGC TGAAGCGGAG CAAGGAGCTC TACCAGGTGG TGGCCGATTT CTCCACGGAC
ATGGCGGTCT GGCGGAATTC CGACGGCACG ATGGCCTACG TCTCTCCCCA CTGCTTCCAG
ATCACGGGGT ACACGGACGC CGAATTCTAT GCCGACCCAG GGCTCATGGA CCGGATCATC
CATCCCGATG ACCGTGACCT GTGGATCGAG CACAAGGAGA CTGTGGGTAC CGAAATCCAG
GCAACTCCCC TGGAATTTCG CATCGTCACC AAGGCGAACG AGGTACGTTG GGTCAGCCAT
TTCTGCCGGT TCGTCCACGA TGAAGCCGGG GAGCTCATCG GGGTCCGGGG GAGCTTCAGC
GATATCTCGG CAAAGAAGAT GGCCCTTGAT GTCGTTATCG CCCAGAAAAA CTTCGCGGAA
AATCTCATCA GCAGCGCGAC AGCCCCCATC TTCGTGCTTG ACAGCCGGAA CCGGATCCTT
TTCTGGAACA AGGCGTGCGA AGAGCTGACC GGATACCCGG CGGCCACGAT GATCGGCACC
GACCGGCAAT GGCAGCCGTT TTATTGCGGC AGGCGGCCCA CCCTGGCGGA TGTGATCATT
GACTGCGGGG AGGAGGCAAC CCTTTCGGAA CTCTATGAGA AATTTTCACC TTCTCAGCTG
GCCAAGGAGG GTATGCAGGC CGAGGGGTGG TATTTGGGCC TCGGCGGCAA GAACCGCTAC
ATCCTCTTCG ACGCCGCCCC CATCAGAAAT GCCGAGGGGG AGCTGGTGGC GGCCATCGAG
ACGTTCCACG ACATCACGGA CCGGCAGATC GCCGAGGACA GCGTGGTTCT CCTGAAGGAT
TTCTACCTCA CCCTGTTCGA GGAGTTTCCG GCCCTCATCT GGCGTTCCGG CACCGATGCG
AAATGCAACT ATTTCAACAA GACCTGGCTC CAGTTCACCG GCCGTTCCCT GGAGGAGGAA
CTGGGGGGCG GGTGGGCCGA AGGGGTCCAC CCGGAAGACC TGGAACGGTG CGTCTCCACG
TATCTACGGG CGTTCGACAG TCGCGAACCA TTTTCCATGG AATACCGCTT GCGTTGCCAC
GATGGTGACT ACCGGTGGAT TGTGCACACG GGGAGGCCCT TCCAGGAGCC CGACGGCGCT
TTCGCCGGGT ATATCGGGGT CTGTTACGAC ATTACCGACC GCCGGCGGGC GGCGGAAAAA
CTCCGCGAAA GTCAGCGGGA CCTCGCGCAA AAACACAAGC AACTATCCAC CCTGTTCATG
GAGGTTGAAA TGGCCAAAAA GGAGTGGGAG CAGACACTAG ACTGCATTGG CGACCTGGTG
ATCCTGACGG ACAACGAAGG ACACATCCGG CGCTGCAACC GGGCCGTCGT CGAGCTTGCC
GGTCTTCCCT ACCAGGATGT CCTTGGGAGA GAGTGGCGTT CGATCGTTCT CTCGCCCGAG
ATGGAGAGGA TCCGGTTCAC CCAAGAGGGA GGAGAGCTCT TCCACAGGTT GACGGAACGC
TGGTTCTTCT GCGCCATCTA CCCCTTCAGA CAAAAAAATG AAAGCGGGAT GAGTGGGAGC
GTCGTCACAC TTCACGATAC CACGGAGCTG AAAAAGGTCG GCGAAGCCCT GGAGAAGGCC
TACGGCGAGT TGAAGGAGGC CCAGGGACAG ATGCTCCAGC GGGAAAAAAT GGCCTCCATC
GGGCAGCTGG CCGCCGGCGT GGCCCATGAG ATCAACAATC CCATCGGTTT CATCATGAGC
AACCTCGGAA CCCTCGGTAA GTATCTGGGA CGGATTCGGG AATTCATCGC CGCCCAGGAT
GAGACCATCG CCGAACTGGA AGGGGAAGCG GTGTCGCAGC GCCTCGCCCA AGCAAAAAAG
ACGCTGAAGA TAGAGTACAT CATGGGAGAC ATCGACGGCC TCATCACCGA ATCCCTCGAC
GGGGCGGAGC GGGTGAAGAA GATCGTGCAG GATCTCAAGG GATTCTCCCG GGTGGATGAG
GCAGAGGTGA AGGTGGTGGA TCTGCGCGAG TGCCTCGACA GCACCATCAA CATCGTCTGG
AACGAGTTGA AGTACAAAGC GACTCTCAAG AAGGAGTACG GCGACGTCCC TCCCCTGCGG
TGCAACCCCC AGCAGCTCAA CCAGGTATTC ATGAATCTCC TCGTGAATGC CGGCCATGCC
ATCGAGAGCC AGGGAGAGAT TACCGTCCGG ACCTGGCGTG AGGGGGAGGA CGCCTTCATT
GCCATTTCCG ACACTGGCTG CGGGATTCCC GAGGAGATCA GAGCCCGGAT CTTCGAGCCC
TTCTTCACCA CCAAGGAGGT GGGAAAGGGG ACGGGGCTCG GGCTTTCCAT CAGCTACGAC
ATCGTGAAGA AGCACGGCGG CGAGATTACC GTGGAGAGCG AGCAAGGCCG GGGGACCACC
TTCACCGTGC GGTCCCTGTC CGGGAGAGGA ACTGATATGG ACGAACAGGT ACGCATTCTC
TGTGTGGATG ATGAGATGAA CGTGCTCCGG TCGCTGGGAC GGATGTTCCT CGACGACAAC
TACGACATCC TTACCGCTTC GTCGGCGGCC GAGGGGCTGG AAATCCTCGA GCGGGAGTCC
CCGGTGCAGA TCGTTATCTC TGACTACCGG ATGCCGGTCA TGAACGGGGT CGATTTTCTC
CGTAAGGTCT GTACCCAGTG GCCCGACACG GTCCGCATCG TCCTGTCGGG GTATGCCGAC
ACGGCCGCCA TTGTCGCCGC CATCAACGAG GGGCAGATCT ACAAGTTCGT CCCCAAGCCG
TGGACCGACG ACGAACTCAG GGTTACAGTG ATAAACGCCC TGGAGAAGTA CCAGCTCCAA
AAGCATAACG CCAAGCTCCT TGATGAGTTG AGCCGGTCCA ACGAGGAGCT CGTCCTTATG
AACGAGAACC TGGAGGCGAT CGTTGCCGAA CGGACCGAGG AAGTCCTGTT CCGCAACCGG
GCCCTCAGTG CCGCCCAGAA CATCCTCGAC GCTTTGCCGG TGGGGGTCCT GGGGATGGAC
ACGGAGGGGA CGGTGGTCCA ATGCAACCGG AGTGCGGCGC GGCTTCTGGG GCTCGATGAA
TACGCAGTCG TCGGTAGAGG CGCAGCCGAA GCCCTGTCGC CGGAGATCTG TGCGTTCATT
GACGAGCTCG CCCGGGAAAA GACCTCCATG TGCCGGCTAT TGGCCGGTGT CGCCGGAGTC
CGGAGTCTGG GGGTGTATCT CAAGGAGGGG GAGCAGGAGG GAATCGTTCT TGTCTTCAAT
GGGGAGGAAC CCCTATGA
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| Protein sequence | MLKESATFAD KLAVTIFFKG KHMRPLSLKS KMSITVFLLV AVLMSSLAFF SYGYFEGEFK
RLICAQQFTL VSSLADEVDD ELATSSALLR ETAKRMPLDA YGDPLKAQRY LDGCAETLSV
FDDGLSLFSP EGTLMAATPH EPNLLGKDYS YREYFRQTVA TGRPHISIPY CTTRQHRNPA
VMFTVPLFGT DGKLAGILAG SFDLLKDNFL GKIEKTRVGK TGYLYTFNAD RRLITHPDSP
RILETVPVGK NIGFERALQG FEGSMENVTS RGNRGITSFK RLRNASWTIA AHYPVDEAYA
PVHAVKKYLL AALVGAILLS IFVVRLTMAY LTAPLLHFTR HVANLGDMSP KGRRFSAPSR
DEIGTLAETF NAMVARLEKK EEELKRSKEL YQVVADFSTD MAVWRNSDGT MAYVSPHCFQ
ITGYTDAEFY ADPGLMDRII HPDDRDLWIE HKETVGTEIQ ATPLEFRIVT KANEVRWVSH
FCRFVHDEAG ELIGVRGSFS DISAKKMALD VVIAQKNFAE NLISSATAPI FVLDSRNRIL
FWNKACEELT GYPAATMIGT DRQWQPFYCG RRPTLADVII DCGEEATLSE LYEKFSPSQL
AKEGMQAEGW YLGLGGKNRY ILFDAAPIRN AEGELVAAIE TFHDITDRQI AEDSVVLLKD
FYLTLFEEFP ALIWRSGTDA KCNYFNKTWL QFTGRSLEEE LGGGWAEGVH PEDLERCVST
YLRAFDSREP FSMEYRLRCH DGDYRWIVHT GRPFQEPDGA FAGYIGVCYD ITDRRRAAEK
LRESQRDLAQ KHKQLSTLFM EVEMAKKEWE QTLDCIGDLV ILTDNEGHIR RCNRAVVELA
GLPYQDVLGR EWRSIVLSPE MERIRFTQEG GELFHRLTER WFFCAIYPFR QKNESGMSGS
VVTLHDTTEL KKVGEALEKA YGELKEAQGQ MLQREKMASI GQLAAGVAHE INNPIGFIMS
NLGTLGKYLG RIREFIAAQD ETIAELEGEA VSQRLAQAKK TLKIEYIMGD IDGLITESLD
GAERVKKIVQ DLKGFSRVDE AEVKVVDLRE CLDSTINIVW NELKYKATLK KEYGDVPPLR
CNPQQLNQVF MNLLVNAGHA IESQGEITVR TWREGEDAFI AISDTGCGIP EEIRARIFEP
FFTTKEVGKG TGLGLSISYD IVKKHGGEIT VESEQGRGTT FTVRSLSGRG TDMDEQVRIL
CVDDEMNVLR SLGRMFLDDN YDILTASSAA EGLEILERES PVQIVISDYR MPVMNGVDFL
RKVCTQWPDT VRIVLSGYAD TAAIVAAINE GQIYKFVPKP WTDDELRVTV INALEKYQLQ
KHNAKLLDEL SRSNEELVLM NENLEAIVAE RTEEVLFRNR ALSAAQNILD ALPVGVLGMD
TEGTVVQCNR SAARLLGLDE YAVVGRGAAE ALSPEICAFI DELAREKTSM CRLLAGVAGV
RSLGVYLKEG EQEGIVLVFN GEEPL
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