| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3469 |
|---|
| Symbol | |
|---|
| ID | 3739182 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 3887532 |
|---|
| End bp | 3890870 |
|---|
| Gene Length | 3339 bp |
|---|
| Protein Length | 1112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637780758 |
|---|
| Product | trehalose synthase/ maltokinase-like |
|---|
| Protein accession | YP_386403 |
|---|
| Protein GI | 78224656 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
|---|
| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA GAGAACCGTT GCGGGGCGGC AATCCCCTCT GGTACCGGGA CGCCATTATC
TACCAGCTCC ACGTCAAGGC CTTCGCCGAC TCGGACGGCG ACGGCATGGG GGACTTCCGG
GGCCTCATGG GGAAGCTCGA CTATCTCCAA TCCCTGGGGA TCACCGCCAT CTGGATCCTC
CCCTTCTACC CTTCGCCGCT ACGGGATGAC GGGTACGACA TCGCCGACTA TTACAGCGTG
AACCCCAGCT ACAACACCCT GCGGGAATTC CGGGAGTTCC TCCGGGCGGC ACACGCCCGC
CGCATCCGGG TCATCACTGA GCTGGTCCTC AACCACACCT CGGACCAGCA CCCCTGGTTC
CAGCGGGCCC GCCGGGCCAA ACCGGGATCG GCCCACCGCG ACTACTACGT CTGGAGTGAC
AACCCCGACC GCTACCAAGG AACCCGGATC ATCTTCCAGG ACTTCGAAAC CTCCAACTGG
AGCTGGGATC CGGTGGCCAA GGCCTACTAC TGGCACCGGT TCTACTCCCA CCAGCCCGAT
CTCAACTACG ACAACCCCAA GGTCCAGGCG GAGATGCTCC GGGTCATCGA CTACTGGCTC
GGGATGGGAG TGGACGGGGT GCGCCTCGAC GCGGTCCCCT ACCTCTTCGA GCGCGAGGGG
ACCAACTGCG AGAACCTCCC CGAAACCCAC GCCTTCCTGA AGAAGCTCCG GGCCCACGTG
GACGCCTCGT TCCCCAACCG GATGCTCCTC GGCGAGGCCA ACCAGTGGCC CGAAGACGCC
ATCGCCTACT TCGGCGAGGG GGACGAGTGC AACATGCTCT TCCACTTCCC CCTCATGCCC
CGTATGTACA TGGCCATCGA AATGGAGGAC CGCTTCCCCG TAATCGACAT CATCGACCAG
ACCCCCGCCA TCCCCGAGGG GTGCCAGTGG GCCATCTTCC TCCGCAACCA CGACGAGCTG
ACCCTGGAGA TGGTCACCGA CGAAGAGCGG GACTACATGT ACCGGATCTA CGCCGCCGAC
CCGAAAGCGC GGATCAACCT GGGGATCCGG CGGCGCCTCG CTCCGCTCAT GGAGCGGGAC
CGGCGGAAGA TCGAGCTGAT GAACGCCCTT CTCTTCTCGC TCCCCGGCAC CCCCATCATC
TACTACGGCG ACGAGATCGG CATGGGGGAC AACTACTACC TGGGGGACCG CAACGGCGTC
CGCACCCCCA TGCAGTGGAG CCCTGACCGC AACGCCGGCT TCTCCGGCGC CAACCCCCAG
CGGCTCTACC TGCCGGTCAT CATCGACCCC GAATACCACT ACGAGGCGGT AAACGTGGAG
ATTCAGGAGC GCAACCCCAC GTCGCTCTTA TGGTGGATGC GCCGCACCAT CGCCGTGCGC
CGCCGCCACC GGGCCTTCAG CAGCGGCACC CTGGAGATGC TCTATCCGGC CAATCACCGG
GTCCTCGCCT TTCTCCGGCG CCACGAAGAC GAGGTGATCC TCGTAGTGGG AAACCTCTCC
CGCTTCGCCC AGGCCGTGAG CCTCGACCTG AAGGAGTTCG CCGGCATATC GCCAGCAGAC
CTCTTCAGCC GGAACCGGTT TCCGGTCATC CGCGAAATCC CCTACCCCCT CACCCTGGGC
CCCCACGATC ATTTCTGGTT CATCCTGAGC CGTGCAGAGT CGCCACGCCT GCCAGAGGGA
GAACTGCCGC GGATCAACCT CCCGGGAGGA CTCCCGTGGT GGGAGGCCCT CCAGCATACC
GGAGGGGACA CCCGCCTGGA ACGGGCGACC ACCGACTACC TGAACCGAAG CGGCTGGTTC
CGGGGGAAAG CCCGGGCAAT CATCGGCTAT GCCCTGCGCG ACACCGTGCT TCTGCGGACA
TCAGACCAGG TCTTTCCCCT GTTCTTCCTG GAGGTCCGCT ACCAGAACGG CGCGCCGGAA
ACCTACCTGA TCCCCGTTGC GTTTCTCCGG GGCCCCGGGG CGAAACGGGT CGATGCCGAA
TCGCCACAGG CGGCCATTGC ATCCCTCTCC GTGGGGGACG AAGCAGGGAT CCTCTGCGAT
GCGCTCCATG ACCGGGAGTT CAGGGACGCG CTCCTCGCCC TTGCCCTTGG CCGGCGCCGA
CTCCATGGTA AACGGGAGAG CCTCGTCGTA CCGCTCCATG GGAGAGGAGG CCACGCCGAA
GGAATGCGGG AAACGGAGCA TCTCATTTCC GAGCTCGTCA CGGGGGAAGA GGCGAGCAGT
GTCATCCTCT ATGGCGATCG GCACGTGTTC AAGCTGTACC GCACGGTGGA ACCGGGGGTG
AATTCGGAGG TGGAGCTGGT CCGGTTTCTG ACGGAAAAGT CCCGCTACCC CAACATTGTC
CCCTTCCAGG CGAGTCTCGA GTTGCGCCAT CCCGGCACCG AACCATGCAC CATTGGCCTT
GTGCAGGAAT ATGTGAAAAA CCAGGGTAAC GGCTGGCGGC TCGCGCTCCA CCTCCTCGGC
CAGTACTTCG AGCGGATTCT CTCCCGCCGG GGCGAGATCC CTCCTCCGCC GAAGCGGTTC
TCGAGCCTCA TAGACGGCAG CGCCTGCACC GTTCCGGAAC CGGTCGCGAA TCTCATTGGC
GGCTTCTATC TGGAAATGGC GGGACTTCTC GGGCGTAGAA CCGCCGAACT CCACCTGGCC
CTTGCCGCGG GGGGAAACGA TCCGGCCTGG AAACCGGAGG CGTATTCAAC CATTTACCAG
CGCTCCGTGT ACCAGTCCAT GCGCAACCAG GCACGGCGCA CCCTTCAGCT CCTGTCCCAG
AACCGCAATC TTCTGCCGAT CGACGACCAG GGACCGGCTG ACCGGGTCCT GGGGGCCGAA
AAGGAGATTC TCTCCTGGCT GGCCCAAATC GTCGGCCGGC GGATAGGGAC GATGAAGATC
CGCATCCACG GCAATTTTCA CCTGGGGAAA GTGCTCTTCA CCGGCAAGGA TTTCGTAATC
CTCGACTTCG AGGGGGAGCC GGACCGGACC CTCAGCGAGC GCCGCATCAA GCGCTCTCCC
CTGAGGGACG TGGCATCAAT GATCCGCTCC TTCCACGCTG CCACGCTGAC TGCCCTCGCA
CGGCATGGGA ACGGCCGTTC CGGAGACGTC CAGCTTCTGG AGCCGTGGGC GGATGCCTGC
TATTACCACG TGAGCTGCCG CTACCTCGCG GGGTACCTCG AACGGATGGG GAACAGTCCC
CTCGTTCCGG CAGACCGGAA CGACCTGGCG ACCCTCCTCC GCTCGTTCCT GCTCGACAGG
GCGCTCCGCG ACCTCGGGTT CGCCCTGGGC AACCGCCCCG AAACGGCCTC GTCCCCCCTG
AAGGGGATCG AGACGGTGCT GCGGGAATAC GGGGAATAG
|
|---|
| Protein sequence | MARREPLRGG NPLWYRDAII YQLHVKAFAD SDGDGMGDFR GLMGKLDYLQ SLGITAIWIL
PFYPSPLRDD GYDIADYYSV NPSYNTLREF REFLRAAHAR RIRVITELVL NHTSDQHPWF
QRARRAKPGS AHRDYYVWSD NPDRYQGTRI IFQDFETSNW SWDPVAKAYY WHRFYSHQPD
LNYDNPKVQA EMLRVIDYWL GMGVDGVRLD AVPYLFEREG TNCENLPETH AFLKKLRAHV
DASFPNRMLL GEANQWPEDA IAYFGEGDEC NMLFHFPLMP RMYMAIEMED RFPVIDIIDQ
TPAIPEGCQW AIFLRNHDEL TLEMVTDEER DYMYRIYAAD PKARINLGIR RRLAPLMERD
RRKIELMNAL LFSLPGTPII YYGDEIGMGD NYYLGDRNGV RTPMQWSPDR NAGFSGANPQ
RLYLPVIIDP EYHYEAVNVE IQERNPTSLL WWMRRTIAVR RRHRAFSSGT LEMLYPANHR
VLAFLRRHED EVILVVGNLS RFAQAVSLDL KEFAGISPAD LFSRNRFPVI REIPYPLTLG
PHDHFWFILS RAESPRLPEG ELPRINLPGG LPWWEALQHT GGDTRLERAT TDYLNRSGWF
RGKARAIIGY ALRDTVLLRT SDQVFPLFFL EVRYQNGAPE TYLIPVAFLR GPGAKRVDAE
SPQAAIASLS VGDEAGILCD ALHDREFRDA LLALALGRRR LHGKRESLVV PLHGRGGHAE
GMRETEHLIS ELVTGEEASS VILYGDRHVF KLYRTVEPGV NSEVELVRFL TEKSRYPNIV
PFQASLELRH PGTEPCTIGL VQEYVKNQGN GWRLALHLLG QYFERILSRR GEIPPPPKRF
SSLIDGSACT VPEPVANLIG GFYLEMAGLL GRRTAELHLA LAAGGNDPAW KPEAYSTIYQ
RSVYQSMRNQ ARRTLQLLSQ NRNLLPIDDQ GPADRVLGAE KEILSWLAQI VGRRIGTMKI
RIHGNFHLGK VLFTGKDFVI LDFEGEPDRT LSERRIKRSP LRDVASMIRS FHAATLTALA
RHGNGRSGDV QLLEPWADAC YYHVSCRYLA GYLERMGNSP LVPADRNDLA TLLRSFLLDR
ALRDLGFALG NRPETASSPL KGIETVLREY GE
|
|---|
| |