Gene Gmet_3460 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3460 
Symbol 
ID3739134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3875057 
End bp3876178 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content63% 
IMG OID637780749 
Producthypothetical protein 
Protein accessionYP_386394 
Protein GI78224647 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones71 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCGAAC GGATAAGAGA GATGGTAATC AAGGAGTTCA GCCAGGTCTT CCGGGACCGG 
CGGATGAAGG CGATCATCTT CGTCACCCCC ATCCTGCAGC TCCTCATGTT CGGCTACGCG
GTCACTACAG ATGTCAAGAA TATCACCACC GCCGTTTACG ACCTGGACCG CTCATATGAA
AGCAGGGAGC TTGCCCGAAG ACTTGAATCC TCGGGCTACT TCACCATCAC CTCCACCCCT
GCTTCGCCGG AGGAGCTGGG GGAACTCATC GACCGGGGGA AGGTCCTCGC TGCGGTGCAG
GTGAACCGCG GGTTCGGCCG CGACCTGGCG CGGGGGATCC CCACGGAGGT GCAGGTGATC
GTGGACGGCA CCGACTCGAA CACCGCCTCT GTCGCCATGG ACTACGCCAC GCGGGTCATT
GCCCGGTTCG GCAAGGATAT GGGGAGCCGG GCGATGACCC GGCCCCTCGC GAAGACGGGG
AGAGTCGATC TCCGCCCCCG TGCCTGGTAC AACCCGGATC TTCGGAGCCG AAACTACAAC
GTCCCGGGGG TCATCGCCAT CATCATCATG CTCACCTCTC TGCTGCTCAC CGCCATGGCG
GTGGTGCGGG AACGGGAGAT CGGGACCATG GAGCAGCTCA TGGTAACCCC CCTGAAACCG
GTGGAGCTGA TCCTGGGGAA GACCATCCCC TTCGCCGTCA TCAGCTTCTT CGACATGGCA
CTGGTGACCA CGGTCGGGGT CTTCTGGTTC GGCATCCCCA TAAAGGGCTC CCTGCCGCTT
CTCACCCTCG CCACCGGCAT CTACCTCCTG TCGGTCCTCG GGATCGGGCT CTTCATCTCC
ACCATCTCCC GGACGCAGCA GCAGGCCCTC ATGGCCACCT TTCTCTTCTA CATCCCGGCG
GTGCTCCTCT CCGGCTTCAT GTTCCCCATC GAGAACATGC CGGAGGCGAT CCAGTACGGC
ACCTTCCTCA ATCCGCTCCG CTACTTCCTG GTCATCATCC GGGGGATCTT CCTGAAGGGA
AACGGCATCG GCGTCCTCTG GCCCCAATTG GCCGCGCTCC TGGCCCTGGG GGTGGCGGTC
ATGTCCCTGA GTGCCCTGCG GTTCCGCAAG AGACTCGGCT GA
 
Protein sequence
MFERIREMVI KEFSQVFRDR RMKAIIFVTP ILQLLMFGYA VTTDVKNITT AVYDLDRSYE 
SRELARRLES SGYFTITSTP ASPEELGELI DRGKVLAAVQ VNRGFGRDLA RGIPTEVQVI
VDGTDSNTAS VAMDYATRVI ARFGKDMGSR AMTRPLAKTG RVDLRPRAWY NPDLRSRNYN
VPGVIAIIIM LTSLLLTAMA VVREREIGTM EQLMVTPLKP VELILGKTIP FAVISFFDMA
LVTTVGVFWF GIPIKGSLPL LTLATGIYLL SVLGIGLFIS TISRTQQQAL MATFLFYIPA
VLLSGFMFPI ENMPEAIQYG TFLNPLRYFL VIIRGIFLKG NGIGVLWPQL AALLALGVAV
MSLSALRFRK RLG