Gene Gmet_3438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3438 
Symbol 
ID3741200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand+ 
Start bp3859560 
End bp3860156 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content61% 
IMG OID637780729 
ProductXRE family transcriptional regulator 
Protein accessionYP_386375 
Protein GI78224628 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTGC CAGACATAAA ATCCCAGATC AAGGAACTGC GGCTCGGCGA AAAGGTTCGC 
AAGCTCCGCC AGGAACAGCG GCTCACCCTG CAGGAGCTCT CGGAACTCTC CGGCCTCTCC 
AAGCCGCTCC TGTCCCAGAT CGAAAACGAT CAGGTCACCC CCCCCATCGC CACGCTCCTC 
AAGATCTCAA AGGGGCTCAA GGTCGGGATC CACTACTTCT TCGAGGAAGA GGAAGACCAG 
CAGAAGCTGG TGCTGACGCG GGCCTCCCAG CAGACAGCCA CCCGGCGCCG TACCGGGAAC 
GACGCTCCCC ACGGCTACGT CTACCGCTCC CTCGCCCCCG GCATCCGCCA CAAGCCCATG 
GAGCCGTTCC TCGTGGAATT CGAGCTGACA GAGTGGGACG ACGCCTTCTT CTACCGCCAC 
GACGGCTTCG AGTTCATCTA TCTTCTGGAA GGGGAGCTGG AATTCCACTA CGGCACCGAC 
ATCATGCGCC TCAACCCGGG TGACAGCATC TACTACGATT CCTCCGAGCC CCACGGCTAT 
GTGTCGGTGG GAGAGCAGAA GGCAACAGCG GTGGCCGTCC TCTACTCGAA GGATTAG
 
Protein sequence
MTVPDIKSQI KELRLGEKVR KLRQEQRLTL QELSELSGLS KPLLSQIEND QVTPPIATLL 
KISKGLKVGI HYFFEEEEDQ QKLVLTRASQ QTATRRRTGN DAPHGYVYRS LAPGIRHKPM 
EPFLVEFELT EWDDAFFYRH DGFEFIYLLE GELEFHYGTD IMRLNPGDSI YYDSSEPHGY 
VSVGEQKATA VAVLYSKD