Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3219 |
Symbol | |
ID | 3740974 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3618425 |
End bp | 3620422 |
Gene Length | 1998 bp |
Protein Length | 665 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637780506 |
Product | excinuclease ABC subunit B |
Protein accession | YP_386157 |
Protein GI | 78224410 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.0533109 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.000839421 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACCGTT ATACCCTGGT AAGTGACTAT ACTCCCCGCG GAGACCAACC GAGGGCCATC GAGGAACTCA GCGAGGGAAT CCTCCGGGGC GACCGGCACC AGGTTCTCCT GGGGGTCACC GGCTCGGGGA AGACCTTCAC CATGGCGAAC GTCATCGCCG CCACCAACCG TCCCGCCCTG GTCCTGGCCC CCAACAAGAC CCTGGCTGCG CAACTCTACG GCGAATTCAA GGAGCTCTTC CCCCACAACG CCGTGGAGTA CTTCGTCTCC TACTACGACT ACTATCAGCC CGAAGCCTAC ATCCCCACCA CGGACACCTT CATCGAGAAG GACTCCTCCA TCAACGACGA GATCGACAAA CTGCGCCACG CGGCCACCCG CAGCCTCCTG ACCCGGCAGG ACGTGATCAT CGTGGCCTCG GTGTCGTGCA TCTACGGCAT CGGCTCCCCG GCCGAGTATC AGGCAATGCA CATCTTCTTT CACGAGGGAG AGGAGTACGG GCGGGACACC CTGCTGCGCA AGCTCGTGGA GATCCAGTAC GAGCGTAACG ACATTGATTT CCATCGGGGA ACCTTCCGGG TGCGTGGGGA CATCGTGGAG ATCTTTCCGG CCCACGAGGA CGAGAAGGCG CTGCGGATCG AATTCTTCGG CGACGCGGTG GAGGCCATCA GCGAGATCGA TCCCCTGCGG GGGGTGGCGC ACCAGCGGCT TGCCAAATGC GCCGTCTATC CTGCGTCCCA CTACGTGGCC ACCCGGGAAA CCCTTGAGCG GGCAATCGAA GAAATCAGAG TAGCCCTGCG GGAGCGAATC CAGTGGTTCC GGGAACGTAA CATGCTCGTG GAGGCCCAGC GGCTCGAGCA GCGCACCATG TTCGACCTGG AAATGATGGA AGAGATGGGG TTCTGCCAGG GAATCGAAAA CTACTCCCGC CACTTTGACG GCCGGGCGCC GGGGGAGCCC CCCTACACAC TCCTCGATTA TTTCCCGAAG GACTTCCTCC TCTTCGTGGA CGAGTCTCAC ATCACCGTCT CCCAGGTGGG AGGGATGTAC CGGGGGGACC GAAGCCGCAA GGAGACCCTG GTGAATTACG GGTTCCGCCT CCCGTCGGCC CTGGACAACC GCCCCCTCAC CTTCCAGGAG TTCACTGCCC GGCTCAACCA GACGATCTAC GTCTCCGCCA CCCCCGCCGA CTACGAATTG CAGCAGGCCG GCGGCGTGGT GGTGGAACAG GTGATCCGCC CCACCGGCCT CCTGGACCCG GTCATTGAGG TGAGGCCTGC CGCAGGCCAG GTGGACGACC TCCTCCACGA AGTCCGGGAG ACCGTGGCCC GGGGCGAGCG GGTGCTGGTC ACCACCCTCA CCAAGCGGAT GGCCGAGGAA CTGACCGACT ACTACCGGGA CCTGGGGGTA CGGGTGCGGT ACCTCCACTC GGATATCGAC ACCATCCAGC GGATGCAGAT CATCCGGGAC CTGCGCCTCG GCGAGTTCGA CGTGCTCGTG GGGATCAACC TCCTGCGGGA GGGGCTCGAC ATCCCCGAGG TTTCGCTGGT GGCGATCCTC GATGCCGACA AGGAGGGATT CCTCCGCTCA GCCCGGTCCC TGATCCAGAC CTGTGGCCGG GCCGCCCGCA ATGTCAATGG CCGGGTCACC ATGTACGCCG ACGCGGTAAC CGGCTCCATG GAGGCATGCA TCGAAGAGAC CGCACGGCGC CGGACGATCC AGGAGGCTTT CAACACCGAG CACAACATCA CCCCCCGGAC GGTGAAAAAG GGGCTCCGCA CCATACTCGA ATCCATCGAG GAGCGGGACT ACTACACCAT TCCCCTTGCG GCCGAGCCTC AAGAAGAATA CGTTCCTGCC GATGAGATTC CTAAGCTGGT GAAGCGCCTC CGCAAGGAGA TGCTTGCCTC TGCCAAGAAC CTGGAATTCG AGAAGGCGGC CGAACTCCGT GACCGGATCA AGAACCTGGA GGAGCGGCAC CTTCAGCTCC ACCCCTGA
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Protein sequence | MDRYTLVSDY TPRGDQPRAI EELSEGILRG DRHQVLLGVT GSGKTFTMAN VIAATNRPAL VLAPNKTLAA QLYGEFKELF PHNAVEYFVS YYDYYQPEAY IPTTDTFIEK DSSINDEIDK LRHAATRSLL TRQDVIIVAS VSCIYGIGSP AEYQAMHIFF HEGEEYGRDT LLRKLVEIQY ERNDIDFHRG TFRVRGDIVE IFPAHEDEKA LRIEFFGDAV EAISEIDPLR GVAHQRLAKC AVYPASHYVA TRETLERAIE EIRVALRERI QWFRERNMLV EAQRLEQRTM FDLEMMEEMG FCQGIENYSR HFDGRAPGEP PYTLLDYFPK DFLLFVDESH ITVSQVGGMY RGDRSRKETL VNYGFRLPSA LDNRPLTFQE FTARLNQTIY VSATPADYEL QQAGGVVVEQ VIRPTGLLDP VIEVRPAAGQ VDDLLHEVRE TVARGERVLV TTLTKRMAEE LTDYYRDLGV RVRYLHSDID TIQRMQIIRD LRLGEFDVLV GINLLREGLD IPEVSLVAIL DADKEGFLRS ARSLIQTCGR AARNVNGRVT MYADAVTGSM EACIEETARR RTIQEAFNTE HNITPRTVKK GLRTILESIE ERDYYTIPLA AEPQEEYVPA DEIPKLVKRL RKEMLASAKN LEFEKAAELR DRIKNLEERH LQLHP
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