Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3167 |
Symbol | |
ID | 3741038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3563997 |
End bp | 3566627 |
Gene Length | 2631 bp |
Protein Length | 876 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637780454 |
Product | helicase c2 |
Protein accession | YP_386105 |
Protein GI | 78224358 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1199] Rad3-related DNA helicases |
TIGRFAM ID | [TIGR01407] DnaQ family exonuclease/DinG family helicase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000644587 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGCCA CAAGAAGTAA TCTCTTCGGC CGAATCAGCC GGAACAGGGG GCGGAGCGAT CCGCCCCTTT TTTCATTGCC CCCTCCCCCC AAACCCGATA TTCTCGACCG GATGAAGCGG TACTTTTCAG AGCAGGCCAT CCTCGACATG CGGGCCGCCA TCGCGGCGGC GGGGGGAAAC GAAGTCTTCT TCCTGGGGCG CACCGACGAA AACCGGATCG TGACCGAGGC GGAGCCCCTG GCCCGGGGGA ACCGGGACGC GGTTGCCGCC ATCATGATCG CCACCAGCTT CGGCGACGTG GTGATCCACA ACCACCCCTC AGGGAACCTT GACCCCTCCC AGGCCGACAT CGAGATCGCA TCCCTCCTGG GGAACCAGGG AGTCGGCTTT TCCATCGTGG ACAACGCCGT GGAGCGGTGC TATCAGGCGG TGGCCCCCTT TGCCCGGCGG GAGACAGAGC GGCTGTCATT CCCCGAGATC GAGCGGATTT TCGCGCCGGC CGGGGTCCTG GCAGCCAATC TCCCCGGTTA CGAGCACCGG GAAGAGCAGC TCCGGATGGC CTTTGCCGTC ACCGAGGCGT TCAATGACGA CCGGGTGGCG GTCATCGAGG CCGGCACCGG CACCGGCAAA TCCCTCGCCT ATCTCGTCCC GGCGGTGCTC TGGGCCATCC GCAACAAGGA GCGGATCGTC GTCTCCACCA ACACCATCAA CCTCCAGGAA CAGCTCATAA AAAAAGACAT TCCCTTCCTC CAGCGCCACG CCGGGGTCCA GTTCCGGGCA GTCCTCGTGA AGGGTCGCTC CAACTACCTC TGCCTCCGGA AACTGGCCGG AGTCAAAAGC GAACCATCCC TCTTCGCCGA TGACCCGGCG GCCGGGGAAC TGGAGGCGAT CATCGCCTGG AGCGAAAAGA CGGCCGAGGG ATGCCGCAGC GATCTCTCCT TCATCCCCAA GCCGGAGACC TGGGAGGAGG TAGCCTGCGA GGCGGACCAG TGCGGCCGGA TCAAGTGCCC CCTTTACGCC CGCTGCTTCT TCTACGGCGC CCGGCGCCAG GCGGCAAGCG CCGATGTCCT CGTGGTGAAC CACGCGCTCC TCATGGCCGA CGTGGCCCTG CGCCAGGAGA CCGGCTACCG CTCCACCGCC ATCCTCCCCC CCTTCGAACG GCTCATGGTG GACGAAGGGC ACCACCTGGA GGACGTGGCC ACCGGGCACC TCTCCTCTCA GGTCTCCCGC CAAGGGATCC TGAAGCTCCT GGGGCGCCTC CAGAATCCGC GCAAAGCCCA GCGGGGGCTC CTGCCCCAGC TCTCGGCCCA GCTCTCCCGG GAGGTGCCGG TGGAGCTGGA CGACCTCTAC CGGGACCTGG CCGAGCGGCT GGAGGAAAAG CTCATCTCCC GCACCCAGGA GCTGGCAGCC GGGGCGGTGC GGGCCATGGA CGCCATCGGC CTCGCCCTCC TCTCCCACCT GAAGGGGAAG GGACCGGAGA ACGGGGAAAA GAAGCTCCGG GTCACCCCGT CCCTCTTCGG CTCAAAGCTC TGGCAGGAGA CCGACGACGA GGCCCGGGAG CTGGCCGCGG ACCTGAACAC GTTCGTGCGG GAGCTGAAGG AATTCCTCAC CGGGTGCGGA CGGCTCCCGG AAGCGGTCCA GGAGAAGCTC TCGGGGCTCC TCGTGGACCT TCGGGGGGTG ACGGGGCGCC TCGAAGCCTT GGCCGCGGAC CTCCTCTTCT TCATCGGCCG GGACGGCGAA GTCTGCCGCT GGTTCGAGGT GAAAAAAGGG GCCAAGGGGA TAGCGGTGAG GCTCTGCGCC TCCCCCCTGG AGGTGGCCGC CTCCCTCAAG CGAACTGTCT TCGACGCCTT CCGGACCGTG GTGGTCACCT CGGCCACCCT GGCGGTGGGG GAAACATTCG ACTACCTGGA AGGTCGGACC GGAATCGCCC TTCTGGACCG GGGACGAGTG ACGGAGCTCC TCCTCGCATC CCCCTTCGAC TACGAGCGCC AGGCCTTCGT CGGTATCCCC GCCGACCTTC CCGAGCCCAC GTCAAGGGGG TTCCAGGAGG CCCTGGAGGT GGCCCTCCAC CGGGGGCTCG CCATCTCCAA CGGCCACGCC TTCGTCCTTT TCACCTCCTA CGACCTCCTC TCCCGCATCC ACGGCAGGAT GGCAGAGGCG CTGCGGCGCC GGGGGCTCAC TCCCATGCGC CAGGGGGAGA TCAACCGGCA CCACCTCCTG GCCCGGTTCC GGAAGGAGCC CAACGCGGTC CTTTTCGGCA CCGACTCCTT CTGGGAAGGG GTCGACGTGC AGGGGAAGGC ACTGGAGCTG GTGGTCATCA CGCGACTCCC CTTCCGGGTA CCGACGGAGC CGATTCTGGA GGCACGGGCC GACCACATCG CCCTCCGGGG AGGGGACCCC TTCATGGAGT ACACGGTCCC CCAGGCGGTC ATCAAGTTCA AGCAGGGATT TGGGAGGCTG ATCCGGAGCA GGGAGGACCG GGGAGCGGTC CTGATCCTCG ACAGCCGGGT GCTTTCGAAA AACTACGGGC GGTTTTTCCT CCGGTCGCTG CCGCCGGTAC GGCTTGCGGA CGGCGGCAGC GGGGAGGTCT TCGGGGAGAT GGAGCGGTTT TTCAGCTCTT CGCCTTCATG A
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Protein sequence | MSATRSNLFG RISRNRGRSD PPLFSLPPPP KPDILDRMKR YFSEQAILDM RAAIAAAGGN EVFFLGRTDE NRIVTEAEPL ARGNRDAVAA IMIATSFGDV VIHNHPSGNL DPSQADIEIA SLLGNQGVGF SIVDNAVERC YQAVAPFARR ETERLSFPEI ERIFAPAGVL AANLPGYEHR EEQLRMAFAV TEAFNDDRVA VIEAGTGTGK SLAYLVPAVL WAIRNKERIV VSTNTINLQE QLIKKDIPFL QRHAGVQFRA VLVKGRSNYL CLRKLAGVKS EPSLFADDPA AGELEAIIAW SEKTAEGCRS DLSFIPKPET WEEVACEADQ CGRIKCPLYA RCFFYGARRQ AASADVLVVN HALLMADVAL RQETGYRSTA ILPPFERLMV DEGHHLEDVA TGHLSSQVSR QGILKLLGRL QNPRKAQRGL LPQLSAQLSR EVPVELDDLY RDLAERLEEK LISRTQELAA GAVRAMDAIG LALLSHLKGK GPENGEKKLR VTPSLFGSKL WQETDDEARE LAADLNTFVR ELKEFLTGCG RLPEAVQEKL SGLLVDLRGV TGRLEALAAD LLFFIGRDGE VCRWFEVKKG AKGIAVRLCA SPLEVAASLK RTVFDAFRTV VVTSATLAVG ETFDYLEGRT GIALLDRGRV TELLLASPFD YERQAFVGIP ADLPEPTSRG FQEALEVALH RGLAISNGHA FVLFTSYDLL SRIHGRMAEA LRRRGLTPMR QGEINRHHLL ARFRKEPNAV LFGTDSFWEG VDVQGKALEL VVITRLPFRV PTEPILEARA DHIALRGGDP FMEYTVPQAV IKFKQGFGRL IRSREDRGAV LILDSRVLSK NYGRFFLRSL PPVRLADGGS GEVFGEMERF FSSSPS
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