Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3129 |
Symbol | |
ID | 3740903 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3525824 |
End bp | 3527164 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637780417 |
Product | Outer membrane efflux protein |
Protein accession | YP_386068 |
Protein GI | 78224321 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000215977 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 81 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAGTATT TTTCCGCCGC TTTATTGTTA CTGGTTCTTA CCCCGTCGTT CCTGCTGGCT GCCGAACCCT CGGTGGCCCT TAACGAGGCC CTGATCCTGG CTCTGAAACA GAACCACCTG GTGAGCGGCG CCGCTTACGA GAAAGAGGCG GCGGTGGAGG GGGCGGCTGC GAGCCGCAGC CGGTACCTGC CCCGGATCGT GGCGGAAGAG GCGTTCAGCG CTTCGGACCT TCCCACCCGC GTTTTCATGA TGAAACTGGA CCAGGGGCGT TTTGCATCGA GCGACTTCGA ACTCGGCAAT CTGAACACTC CCTCTTCCTA CCATGACTTC CGCACGGCGC TTACCCTGGA ACAGCCCCTC TTCGACCTGG GGATCGGCTA CGGTCGGGAG ATGGCAGAGC GGGAGGCGGA GCGGATGGGG TACCGGTTCG AGGGGCGCCG TGAAGATGTG GGGTTCGCAG TTTATGGAGC CTATCTGGGA GTGCAGCGGG CAAAGGCTGT CCTGGCTGCC GCCGAGAAGG ACGTGGAAGA GGCCCGGGAG CACCTGCGGG TGGCCACGGT CCGCGGCCAT GAGGGAACCG GGCTCAAGTC CGACGAATTG CGGGCAAGAA CCTTCCTTTC CGAGGCGGAG GAGCGGACCA TCACCGCCCT CAACGACCTG AAGCTGGCCA AAATGCGCCT GGCCCTCGCC GTGGGAGGCG GACCCGGGGA ATCCCTCGAT ATCCGCGGGG ATGTGACGGG TGAGGCGTTC CGCTTGAACG AGGATGAGAT CGTGCGCCAG GCCGTTGCCA ACCGCCGGGA CCTGAAGGGG GCCGAAAAGG GGGTGGAGCG GGCCGCGGCC GCCGTGGGGC TCGCCCGTAG CGCCTGGTTC CCCACGCTTT ACGCCGCTGC GTCCGTGCAG ATGAACGACA GGGATGTTCC CTTCGGTCGC GATAACGACG GGTGGAGCGC CGGGGTGAAC CTGCGCTGGG AGGTCTTTGA CGGCATGGGA AGGATGCACG GGGCGGCCAA GGCACGGGCC GAGCGGGACG CTGCCGCCCA GTACCTGGAG CAGTTCCGCA AGGAAGTGGA CCTCCAGGTG CGGGAGAGCA TTCTGCGCCG GGCCGAGGCG GGAAAACGGC TGGAGGTGGC GCGCCATGCG CTTCTGGCGG CCGAGGAGGG ATCCCGGCTC GTGAACAAGC GCTTCGCCAA CGGCCTCGCC ACCATGGTGG AGCTTCTGGA TGCCCAGTCG GCCCTCAGCC GGGCGAGGAC CGGACTCGTG GAGCGAGAGG CCGACCACCT GCTGGCAACG GCCCGGATAT ATTACACCGC CGGCATATTC CTGAAGGAGA TGGCACCATG A
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Protein sequence | MKYFSAALLL LVLTPSFLLA AEPSVALNEA LILALKQNHL VSGAAYEKEA AVEGAAASRS RYLPRIVAEE AFSASDLPTR VFMMKLDQGR FASSDFELGN LNTPSSYHDF RTALTLEQPL FDLGIGYGRE MAEREAERMG YRFEGRREDV GFAVYGAYLG VQRAKAVLAA AEKDVEEARE HLRVATVRGH EGTGLKSDEL RARTFLSEAE ERTITALNDL KLAKMRLALA VGGGPGESLD IRGDVTGEAF RLNEDEIVRQ AVANRRDLKG AEKGVERAAA AVGLARSAWF PTLYAAASVQ MNDRDVPFGR DNDGWSAGVN LRWEVFDGMG RMHGAAKARA ERDAAAQYLE QFRKEVDLQV RESILRRAEA GKRLEVARHA LLAAEEGSRL VNKRFANGLA TMVELLDAQS ALSRARTGLV EREADHLLAT ARIYYTAGIF LKEMAP
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