| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3042 |
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| Symbol | |
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| ID | 3741238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 3428975 |
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| End bp | 3429859 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637780331 |
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| Product | tyrosine recombinase XerD subunit |
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| Protein accession | YP_385982 |
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| Protein GI | 78224235 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00000138339 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.959316 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACAGG AGATAGCAGC CTTCATCCGG CACCTGGAAA CGGAGCGCAA CGTCTCGCCC
CACACCCTCG CCGCCTACCG CTCGGACCTG GCCCAGTTCC GGGAGTTCGT CCGGCAGGAA
ACGGGAGCGG CGGCGGAACC GGAAGGGGTT TCGCACCTCC TGATCCGGCG CTGGCTCGCG
CTCCTGCACC GGGACCACAC CAAAAGCTCC GTGGGGCGGA AGCTAGCGGC GGTGCGGGCC
TTTTTCAAGC ACTTGATCCG GACCGGGCGC CTCGTCAAGA ATCCCGCCGA GCTCGTCTCC
ACCCCCAAGA AGGAAAAGAA GGTCCCCTAT CACCTCTCCA TCGACGAGGC GACCGCCCTG
GTGGAAACCC CAAAGGAGCC GGACATCCTG AGCCTGCGGG ACCGGGCCAT CCTCGAAACC
CTTTACTCCT GCGGCGTCCG GGTGTCTGAA CTGACCGGCC TGAACATAGG GGGGATCGAC
CTGGATGACG GCACCGCGCG GGTTCTCGGC AAGGGGGGAA AGGAGCGGAT CGTGCCGGTG
GGAAGCATCG CCCGCGCCGC CCTCTCCCAC TACCTGACCG CCCGAAACCA TCCCCCCCTC
GACGCCCCCC TCTTCACCAA TGCCCGGGGG GGACGCCTCA CCCCCCGCAG TGTCCGGCGC
GTGGTGGACA AGCATATCCT CCGGATCGCC GCCATGCGAA AGATTTCCCC CCACACCCTC
CGGCACACCT TCGCCACCCA CCTGCTGGAA GGGGGAGCCG ACCTGCGAGC CATCCAGGAG
CTTCTGGGGC ACGCCTCCCT CTCCACGACC CAGAAGTACA CCCATGTCGG CATCGACCGC
CTCATGGAAG TCTACGACAA GGCCCACCCC AAGGCCCGGA AATAA
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| Protein sequence | MEQEIAAFIR HLETERNVSP HTLAAYRSDL AQFREFVRQE TGAAAEPEGV SHLLIRRWLA
LLHRDHTKSS VGRKLAAVRA FFKHLIRTGR LVKNPAELVS TPKKEKKVPY HLSIDEATAL
VETPKEPDIL SLRDRAILET LYSCGVRVSE LTGLNIGGID LDDGTARVLG KGGKERIVPV
GSIARAALSH YLTARNHPPL DAPLFTNARG GRLTPRSVRR VVDKHILRIA AMRKISPHTL
RHTFATHLLE GGADLRAIQE LLGHASLSTT QKYTHVGIDR LMEVYDKAHP KARK
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