Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3014 |
Symbol | |
ID | 3740751 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3399518 |
End bp | 3400267 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780303 |
Product | putative lipoprotein |
Protein accession | YP_385954 |
Protein GI | 78224207 |
COG category | [R] General function prediction only |
COG ID | [COG4105] DNA uptake lipoprotein |
TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 0.6887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTA TCCAGAGACG CTCTCTTTTC CCTCTCCTCC TCGTCCTTGT GGTCGCCGGC TGCGCCACCA CTCCGGACGC GGTGAGCCGC AATCCCGAAT CCATGGCCAA GGCGGCGGAA GAGTTCCAGA CCTCCGGCCG CTACGAGGAC GCCATCGCCC AGTGGAAGAA GGTGCGGGAG AGCTATGCCT CGCCGGAACT CACCACCGAG GCCGAGCTTA AGATCGCCGA CGCCCAATTC GCCGACAAGA GCTACATCGA GGCGGCCGCC TCCTACGAAG AGTTCCGCAA GCTCCACCCC AACCACGAAA AGGCTCCCTA CGCCCTCTAC CGTCAGGCTC TCAGCCAATA CGAGCAGATC ACCGGCATCG ACACCGACCA GACGCCGGTA TCCAACGCGG TGACCCTGTT CGAATCGTTC CTCCGGATCT ACCCGTCCTC CGAGTACGCC GCGGAGGTGC GGGACAAGCT CGAAGTCTGC CGCCTCAAGC AGGTGGAGCA CGAAATCTAT GTGGGGCGGT TCTACTACCG TACTGACCAG TACGGGGCAG CCATCAAGCG CCTGGAGGAT GCCCTGAAGA AGTATCCCCG CTCGCCGGCC CACGACGAAA CCCTCTTCTA TCTGGGGTCG GCCTATATCC GCACCGGCGA CAAGGCCAAA GGGCGCGATG CCTTCCAGCG CCTCTTCGCC GAGTACCGGA CGAGCAAATA CGTGGACGAG GCCCGGAAGT TCATGGATAA GAACTTCTGA
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Protein sequence | MNRIQRRSLF PLLLVLVVAG CATTPDAVSR NPESMAKAAE EFQTSGRYED AIAQWKKVRE SYASPELTTE AELKIADAQF ADKSYIEAAA SYEEFRKLHP NHEKAPYALY RQALSQYEQI TGIDTDQTPV SNAVTLFESF LRIYPSSEYA AEVRDKLEVC RLKQVEHEIY VGRFYYRTDQ YGAAIKRLED ALKKYPRSPA HDETLFYLGS AYIRTGDKAK GRDAFQRLFA EYRTSKYVDE ARKFMDKNF
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