Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_3013 |
Symbol | |
ID | 3740750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3397598 |
End bp | 3399394 |
Gene Length | 1797 bp |
Protein Length | 598 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637780302 |
Product | GTP-binding protein TypA |
Protein accession | YP_385953 |
Protein GI | 78224206 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00684443 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.862296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGAAC GGATCAGGAA CATCGCCATC ATCGCCCACG TCGACCACGG CAAAACCACG CTGGTCGACG CCATGCTGAA GCACGCGGGG GTCTTCCGCG AGAATGAGGC CATCACCGAG CGGGTCATGG ACTCCAACGA CCTGGAGAAG GAGCGGGGGA TCACCATCCT CGCCAAGAAC CTCTCGGTGC ACCATGGCCG CTACAAGATC AATATCATCG ACACCCCTGG CCACGCCGAC TTCGGCGGCG AGGTGGAGCG GGTGCTCAAG ATGGTGGACT CGGTGCTCCT GCTGGTGGAT GCCCTGGACG GCCCCATGCC CCAGACCCGT TTCGTGCTCA AGAAATCCCT CGATCTGGGC CTGAAGCCCA TCGTAGTCAT CAACAAGATC GACCGCCCCG GTTCCCGTCC CGACGAAGTC GTCGATATGG TCTTCGACCT CTTCTGTGAG CTGAACGCCA ACGACGAGCA GCTGGATTTC CCCATCGTCT ACACCAGTGC CAAGCTCGGT TTCGCCAAAC TGGACCTCAC CTCCGACTCA TCCAGCATGG AACCCCTCTT CGCCGTGGTG GAATCCAATG TCCGCCCCCC CTCCGGCGAT GCCAAATTAC CGTTCCAGTT GCTGGTCACC AACATTGATT ACAACGAATA CATCGGCCGC ATCGCCACGG GCAAGGTCTT CAACGGCAGC GTCAAGAGCG GCGAAACCGT GGCGCTGGTG CGCCGCGACG GCAGCATCGT CAGGAGCCGC ATCTCGAAAC TCCTGGGCTA CGAGGGGCTC AAGCAGGTAG AGGTTCCGGA AGCGTGCACC GGCGACATCG TCACCGTGGC CGGCTTTGAT GAGGTGGGTA TCGGCGAAAC CCTGGCAGCC GCCGACAATC CCGTGGCCCT CCCCTACGTC TCCATCGACG AGCCGACCAT CGCCATGAAT TTCATCGTCA ACTCCTCCCC CTTCGCCGGC AAGGAGGGGA AATTCGTCAC CTCCCGCAAC ATCCGTGACC GCCTCGACAA GGAGTTGCGG ACCAACGTGT CGCTGCGCGT CGAGGATACC GGGAACGCCG ACACCTTCAA GGTCTCGGGT CGCGGCGAGC TCCACCTCTC CATCCTCATC GAGAACATGC GGCGCGAAGG GTTCGAGATG GCGGTCTCCA AGCCCGAGGT CATCATGCGG GAGTTGGACG GCAAGAAGAT GGAGCCCATG GAGTACCTGG TGGTGGACGT CCCCTCCGAG TTCCAGGGGT CCATCATCGA GAAGATGGGA CCCCGCAAGG GTGAGATGAC CTCCATGCAG CCCATGGGGG AGACGGTGCG CCTTGAGTTC ATCGTGCCGG CCCGGGGACT CATCGGCCTG CGGGGCGAGC TCCTCACCGA GACCCGGGGC ACCGCGGTCA TGACCCACAC CTTCCACGAC TACGCCCCCT ACAAGGGCGA CATCCCGGGA CGCAAGAACG GGGTCCTCAT CGCCATGGAG AACGGCGAGA CCACCGCCTA CTCCCTGGAC GGCCTCCAGC CCCGGGGCAT CCTCTTCATC GGGGCAGGAG TCGAGGTCTA CGGTGGCATG ATCATCGGCC AGCACGCCAA GGACAACGAC CTGGACGTGA ACCCCTGCAA GGGGAAGAAG CTCACCAACG TCCGGGCCTC GGGCTCCGAC GACGCCATCA AGCTCACCCC GCCCCGCATC CTGACCCTGG AGCAGGCCCT GGAGTTCATC GACGACGATG AGCTGGTGGA GGTAACCCCC CAGTCGATCC GGCTCCGGAA GAAGGAGCTG GACCCGAACC GGCGCAAGCG CAAGTAA
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Protein sequence | MQERIRNIAI IAHVDHGKTT LVDAMLKHAG VFRENEAITE RVMDSNDLEK ERGITILAKN LSVHHGRYKI NIIDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG LKPIVVINKI DRPGSRPDEV VDMVFDLFCE LNANDEQLDF PIVYTSAKLG FAKLDLTSDS SSMEPLFAVV ESNVRPPSGD AKLPFQLLVT NIDYNEYIGR IATGKVFNGS VKSGETVALV RRDGSIVRSR ISKLLGYEGL KQVEVPEACT GDIVTVAGFD EVGIGETLAA ADNPVALPYV SIDEPTIAMN FIVNSSPFAG KEGKFVTSRN IRDRLDKELR TNVSLRVEDT GNADTFKVSG RGELHLSILI ENMRREGFEM AVSKPEVIMR ELDGKKMEPM EYLVVDVPSE FQGSIIEKMG PRKGEMTSMQ PMGETVRLEF IVPARGLIGL RGELLTETRG TAVMTHTFHD YAPYKGDIPG RKNGVLIAME NGETTAYSLD GLQPRGILFI GAGVEVYGGM IIGQHAKDND LDVNPCKGKK LTNVRASGSD DAIKLTPPRI LTLEQALEFI DDDELVEVTP QSIRLRKKEL DPNRRKRK
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