Gene Gmet_3000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_3000 
Symbol 
ID3740989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3385652 
End bp3386101 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content64% 
IMG OID637780289 
Productsignal peptide prediction 
Protein accessionYP_385940 
Protein GI78224193 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones74 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.668845 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGTT TGCTTCTCAT TCTCCGCTAC CTGTGGGCCT CTCCCGCAAG CGTTCTGGGG 
CTTCTCCTGG CGGCTGTCGC GATATGTCTG GGGGCCACCT GCCGCGTGGC CGACGGGGTG
GTCGAGGTGG CCGGCGGCAA GCTCTTTCGC CTCTTTCCCC TGCTCCCCCG CATCTTCCAC
TTCGAGGCCA TTACCTTCGG CCATGTGGTG ATCGGGCTCG ATCACTCCCT CCTGGCGCAG
CTGCGCACCC ACGAGCATGT CCATGTCCGC CAGTACGAGC GGTGGGGCAT CCTCCTCATT
CCCCTCTACC TCGGCTCCAG TGCCGTTCAA AAACTGCTGG GGCGCAATCC GTACCTGCAC
AACCGCTTCG AGCTCGAAGC ATTCGCGAAG GCCGCTGCTC CCCCTGCCGG GGTGCATGCG
AGTGCCGAGA AGACCGACGC AAACGCCTGA
 
Protein sequence
MNRLLLILRY LWASPASVLG LLLAAVAICL GATCRVADGV VEVAGGKLFR LFPLLPRIFH 
FEAITFGHVV IGLDHSLLAQ LRTHEHVHVR QYERWGILLI PLYLGSSAVQ KLLGRNPYLH
NRFELEAFAK AAAPPAGVHA SAEKTDANA