Gene Gmet_2952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2952 
Symbol 
ID3740807 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp3342121 
End bp3342678 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content65% 
IMG OID637780243 
Productisochorismatase hydrolase 
Protein accessionYP_385894 
Protein GI78224147 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value0.2688 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGG CATTGCTGGT CATCGACGTA CAGAACGAAT ACTTCACCGG CGCGCTGCCG 
GTGACCCATC CGGCGGGGAG CTTCGCCAAC ATCCTCGCTG CCATGGATGC CGCCACGGCC
AACGGGATTC CGGTGGTCGT CGTCCGCCAT TCGTCCAACC GCCCCGGTGC GGCGAGTTTC
CAGCCGGGAA CGCCGGCCTG GGACCTTCAC CCTGAGGTGG CCCAACGCCC CCACGACCTG
CTGCTGGAAA AGCAGTTGCC GGGGAGCTTT ACGGGCACGG GCCTGGAGGC CTGGCTCCGC
GAGCGGGAGA TCGGCACCGT GGTCATCAGC GGCTACATGA CCCAGATGTG CTGCGACACC
ACGTCCCGCC AGGCGTTTCA CCGAGGCTTC AGCGTGGAGT TCCTCTCCGA TGCCACGGGA
ACGCTGGCGT TTGCAAACAA CGCCGGCTCC GTCACCGCCG AAGAGCTTCA CCGGACGGTG
CTGGTGACAC AACAGCTCAT GTTCGCCACG GTGATGACCA CGGCTGCGTG GGTCGGTTCG
CTGGCTAAGA AGGGCTGA
 
Protein sequence
MKKALLVIDV QNEYFTGALP VTHPAGSFAN ILAAMDAATA NGIPVVVVRH SSNRPGAASF 
QPGTPAWDLH PEVAQRPHDL LLEKQLPGSF TGTGLEAWLR EREIGTVVIS GYMTQMCCDT
TSRQAFHRGF SVEFLSDATG TLAFANNAGS VTAEELHRTV LVTQQLMFAT VMTTAAWVGS
LAKKG