Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2941 |
Symbol | glyS |
ID | 3740835 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3330385 |
End bp | 3332445 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637780233 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_385884 |
Protein GI | 78224137 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.125162 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.000287233 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGAAAGAGT TGTTCCTTGA GATAGGCACC GAAGAGATCC CGGCGGGCTT CATCCCGAAG GCCATGGCCG ATATGGAGGC CCTGCTGGCG AAGGAGCTTG AGAATGCCCG CATCTCCTTC GACGACATCC GGACCCTCGG CACCCCCCGT CGCCTGGCCC TGACGGTGAA GGGTCTTCCG ACGGTCCAGC CCGATGCGGA GATCACTGCC ATGGGGCCGG CCAGGAACGT AGCCTTCGAC GCCGAAGGAA AACCCACCAG GGCTGCCGAA GGGTTTGCCC GGGGGCAGGG GGTGGACGTG GCGTCCCTCA CCCTCGTCGC CACTGAAAAG GGTGAGTACG TGGCCGCCGT CCGCAAGGAG AGCGGTCGCC CCGTGCCGGA GCTCCTGGCC GAGATCCTGC CGCGGCTTGT TGCGAATATC CCTTTCCGCA AGTCCATGCG CTGGGGTGCT CTCGACGTCC GCTTCGCCCG CCCCATCCAC TGGATCGTGG CCCTCTTTGA CGGCGTCGTG GTTCCCTTCA CCTTCGGGAA CATCGAAAGC GGCACCATTT CCCGGGGGCA CCGCTTCATG GCCAACCAGC CCTTCCCGGT GCGGGACTTT GCCCACTATC TGGAGGAGTG CGAGCGCCAC TTCGTCATTC CCGACCCGGA ACGGAGACAG GAGATCATCC GGCGGGAGAT CCACCGGGTT GCCAAGGCCG CCGGCGGGCA TCTTCTCCCC GACGAGGGGC TTCTGGAGGA GGTCTCCTTC CTCTGCGAGT ACCCGAGCGC GGTTCACGGC ACCTTTTCCG CCGAGTTCCT GAAGGTTCCC CGGGAGGTTC TCATCACCTC CATGCGGAGC CACCAGCGTT ACTTCTCCAT TGTCGACGAC GCCGGTAAGC TCATGCCCGG TTTCATCACC ATCAACAACA CCCTCACCGA GGATCCCACC GTGGTGGTCA AGGGGAACGA GCGGGTGCTC AGGGCCCGGC TCTCCGATGC CCGTTTCTTC TTCGAGGAGG ACCAGAAGGT CAAGCTGGAG ACCCGGGTGG AGTCCCTGAA GAACGTGGTC TACCAGCAAA AGCTCGGCAC CTCCTTTGAA AAGATGGAGC GGTTCCGTGC CTTGGCCGAG GGACTTGCCG ACCTCCTGAA CCCGGCGGTG AAAGTGAAGG TTTCCCAGGC CGCGTTCCTC TGCAAGGCGG ATCTCGTCTC CGGCATGGTG GGTGAGTTCC CCGAGGTGCA GGGGATCATG GGGCGCGAGT ACGCCCTCAT CGAGGGGGAG GACGCCGAGG TGGCCGCGGC CATCGCCGAG CACTACCTCC CGACCCAGGC GGGGGGCGAG CTGCCGGCGT CGGACATTGG CGCCTTCGTC TCCATGGCCG ACAAGCTGGA CACCATCTGC GGCTGCTTCG GCGTGGGGCT CATCCCCACC GGTTCCGCCG ACCCCTACGC CCTGCGCCGC TCGGCCCTGG GGATCATCAA TATCATTCTC GACAAGGGGT ACCGCCTCTC CCTGGAGGAG CAGGTGGACA AGGCCCTTGG CCTTCTGGCC GCCAAGCTCA CCCGGCCGGC CGTTGACGTG AAGGCCGACG TTCTGGAGTT CTTCCGGGGC CGGTTCGTGA ACCTGATGGC CGACCGCCAT GCCTCCGACG CGGTGGATGC CGCCGTGGCC GCCGGCTGCG CCGATCTCGT GGATGCCGCC GCCCGGATCG CGGCCCTTTC GGAGTTCAGG TCGCACCCCG ACTTCGAGCC TCTGGCCGTG GCCTTCAAGC GGGTCGGCAA CATCGTGAAG GAAGGGGTGG ACGCCCCTGT GGATACGGCT CTCTTCCAGG ACGCCGCCGA GGGGCTCCTC AACGATGCCG TCCAGGGGGT TGCCGTATCG GTGCGCGAAA AGATCGCAAC CGGAGCCTAT CTGGAAGCCC TCACGGAGAT CGCCGCCCTG CGGGGACCCG TCGACACCTT CTTCGACAAG GTCATGGTCA TGGCCGAGGA CGAACGGGTC CGGACCAACC GTCTGGCGCT CCTGACCGGG ATCGCCCGGA TGCTCGGCGC CATCGCCGAC TTCGCCAAGA TAGCCGCCTA G
|
Protein sequence | MKELFLEIGT EEIPAGFIPK AMADMEALLA KELENARISF DDIRTLGTPR RLALTVKGLP TVQPDAEITA MGPARNVAFD AEGKPTRAAE GFARGQGVDV ASLTLVATEK GEYVAAVRKE SGRPVPELLA EILPRLVANI PFRKSMRWGA LDVRFARPIH WIVALFDGVV VPFTFGNIES GTISRGHRFM ANQPFPVRDF AHYLEECERH FVIPDPERRQ EIIRREIHRV AKAAGGHLLP DEGLLEEVSF LCEYPSAVHG TFSAEFLKVP REVLITSMRS HQRYFSIVDD AGKLMPGFIT INNTLTEDPT VVVKGNERVL RARLSDARFF FEEDQKVKLE TRVESLKNVV YQQKLGTSFE KMERFRALAE GLADLLNPAV KVKVSQAAFL CKADLVSGMV GEFPEVQGIM GREYALIEGE DAEVAAAIAE HYLPTQAGGE LPASDIGAFV SMADKLDTIC GCFGVGLIPT GSADPYALRR SALGIINIIL DKGYRLSLEE QVDKALGLLA AKLTRPAVDV KADVLEFFRG RFVNLMADRH ASDAVDAAVA AGCADLVDAA ARIAALSEFR SHPDFEPLAV AFKRVGNIVK EGVDAPVDTA LFQDAAEGLL NDAVQGVAVS VREKIATGAY LEALTEIAAL RGPVDTFFDK VMVMAEDERV RTNRLALLTG IARMLGAIAD FAKIAA
|
| |