Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2928 |
Symbol | |
ID | 3741033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | + |
Start bp | 3315042 |
End bp | 3316094 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637780220 |
Product | cytochrome c family protein |
Protein accession | YP_385871 |
Protein GI | 78224124 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01905] doubled CXXCH domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00000703284 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 2.01033e-17 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGACAACCC TACGATCAGC AACTCTCGTG CTATCGATTC TCCTGGTCTT CCCGATGGTG GCCCTTGCCG CCGCAGCTAC CGAAGACGGA TGCATCGGTT GCCACGGCGA CAAGAATATC AGCGGCAAGA GCGGGTCCCA TCTCTTCATC GACCCGGGCC AGTACAAGAA AACCAGCCAT TCGATCATCG GCTGCACCTC TTGCCATGAA TCGGTGACAT CCAATCACCC GAATGACGGC ATCAGGCCGT CGCGGGCCAC CTGCAAGGAA TGCCACAGCC CGGTCCACCA GGAGTATGCC GCGAGTCTCC ACGCCAATAA CGCGGCGTGT GCCGACTGCC ACAATCCCCA TGCGGTGAAG CCGCCGGCGA TGACGTCGGC CCGGGACATG AACGCCATGT GCGCCAAATG CCACGAAACC GCCAAGATGG TCAATGTTCA CGCCAAATGG CTTCCGCAGG CAGACCTCCA CATCGACGCC CTCCCCTGCA TCACCTGCCA CACCGGTTCG CAAAATTACG TCATAACCAT GTACATCGAG AAACGGCTGG GGACAAAGGA GCACAGCGAC TTCAAGGTGG CCAGCTTTGA CGAGCTCACC CAGCTCGTGC CGGGCGACAA GGACGTGAAA GCCCTTATCG ACACCAATGG CGACAACTTC ATCTCCCTGG CTGAGCTTCG GTCCTTCAAC CGCAATTCGA AGCATGACGA CATGAGACTC TGGGGAATGA TGACCCCCGA AAAGGTAACC CACAGCTACC AGATTCTGGA CAACCGCTGG GACTGCACCT TCTGCCATGC CTCCGGCCCC AGGGCCATGC AGACGAGCTT CGTCGCCTTC CCGGAAAAGG GAGGCACCTA CACCCGCGTG GCCGTCGAGA AGGGAGCCGT CCTCGACGTC CTCTACGGGA CTCCCGACTT CTACATGATG GGCTCCACCC GCAGCACGGC GCTCTCCATC GTCGGCGGAC TCATCGTCCT CGGCGGCATG GGGTTTGCCG GAGTGCACGG GACACTAAGA TTCCTCACCA GAAAAAATAG AAAGGAGCAC TAA
|
Protein sequence | MTTLRSATLV LSILLVFPMV ALAAAATEDG CIGCHGDKNI SGKSGSHLFI DPGQYKKTSH SIIGCTSCHE SVTSNHPNDG IRPSRATCKE CHSPVHQEYA ASLHANNAAC ADCHNPHAVK PPAMTSARDM NAMCAKCHET AKMVNVHAKW LPQADLHIDA LPCITCHTGS QNYVITMYIE KRLGTKEHSD FKVASFDELT QLVPGDKDVK ALIDTNGDNF ISLAELRSFN RNSKHDDMRL WGMMTPEKVT HSYQILDNRW DCTFCHASGP RAMQTSFVAF PEKGGTYTRV AVEKGAVLDV LYGTPDFYMM GSTRSTALSI VGGLIVLGGM GFAGVHGTLR FLTRKNRKEH
|
| |