| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2918 |
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| Symbol | |
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| ID | 3741023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 3302783 |
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| End bp | 3306328 |
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| Gene Length | 3546 bp |
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| Protein Length | 1181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637780210 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_385861 |
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| Protein GI | 78224114 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.00402936 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGACCATTA CCAGCAACTC CACGTATTTC CCCTTCAATC TGCAGGTTGC CGCCCGGTTC
TGGCGTGCCC TGGATCTGGC GCCGTCGGCC CGGGAGCTGG AGCGCCTGGG GAGGCCGCCC
ATCCTGTTCT GCCGGGAGCT GGCGGCACGG CTCAACCGCC TGCCGGAGCG GGCGGGTCGA
CCGGTTCAGG GAGGAGTTCT CAATCTCTAC TCACTCCAGG GGGCCATCTT CCGGCATCTG
ATCACCCGCT ACGCACAGGG ACAGGCTCCG GGGGTGCTGG AGAAGTCCCT GGCCGATGCC
GGTTTCCCCC TTGACTCACC GCAGCTGACA GCTCTTCTGG AGCGGTTCGC TACCCTCTTT
CCGCCGGCGG CGCTCCTCTA TGGCGATGCC GAGTCCCCCG CGGCCTGGCT TGCGGCTGGC
GGGACTTCTC AGCGGCTCCA GGCCGTGGAA GAACTCCTTC TCCTCTCCCT CGCCGCCGAG
AACAGCGCCC TGGACAGCTT TAGGGAGCTG GTGGACGACA CCGAACTGGC CGCCACGGCC
CCCTACCGTG CTGCCGTTAC CGGCCTGGAG AGGGCGTTGG CCGATGCCCT CCCCGTGGCC
GGGTTCGGCG TGTCGCTGAC GGAGCTTCTC CGGGCGCCGC TGCGGGCCGC CCCCGAATCC
CTGGCGGGTC AGCTGGCATA CATGCGGGAT GCGTGGAGCC CCTTACTCCC TGATGAGCTT
CTGGCCCAGT TGGAGGTGGC CTTCGGCATC GTGGAGGAGG AGACGCGCCC CTTCTGGAGC
GGTGGCGGTG GCGCCCCCGC GCCGGTCCTG GAGTTCGGCC CCGGCGCGGG GTTCCCGGCC
CCCGATGACC ACTATCCCGA GCCCGAGCAG TTCTCCGCCG ACGTGGACTG GATGCCCAAC
GTGGTGCTCA TGGCCAAGAT GGTCTATGTC TGGCTCGGCC AGCTCTCCGG CTGGTACGGG
AAAGATATTC ACCGTCTCGA CCAGATTCCC GATGAAGAGC TGGACAAGCT CGCCCGTTGG
GGCGTCACGG GGCTGTGGCT CATCGGCATC TGGGAGCGTT CCCCCGCCTC CCAGACCATC
AAGCGGATGT GCGGCAACCC CGAGGCCATC GCGTCCGCCT ACTCCCTCTA CGACTACACT
ATCGCCCATG ACTTGGGAGG ATGGGAGGCC CTGGCGGACC TGCGGGAGCG TGCCCTGAAG
CGGGGCATCA GGCTTGCCAG CGACATGGTG CCGAACCACA CCGGCATCTA CTCCAAGTGG
ATCGTGGAGC ATCCCGACTG GTTCGTGCAG CTGGACTACC CGCCGTACCC CACCTACCGC
TTCACCGGCC CCGACCTCTC CTCCTCCCCC GAGGTCTCCA TCCACATCGA GGATGGCTAC
TGGGACAAGA GCGACGCCGC CGTGGTCTTC AAGCACTACG ACCACCGCAA CGGCCGGACC
CGCTACATCT ACCACGGCAA CGACGGCACC AGCACCCCCT GGAACGACAC GGCCCAGCTG
GACTACCTGA ACCCCGAGGT GCGGGAGGCG GTTACCCGGA CCATCCTCCA CGTGGCCCAC
AACTTTCCCA TCATCCGCTT CGATGCCGCC ATGACCCTGG CCAAGAAGCA CTACCAGCGC
CTCTGGTTCC CCCAGCCGGG CCTGGGGAGC GGCGTCCCCT CTAGGGCCGA GCGCGGCCTG
ACCCGGGCCG TCTTCGACGC CGCCATGCCC GAGGAGTTCT GGCGCCAGGT GGTGGACCGG
GCCGCGGCGG AGACGCCGGA CACGCTCCTT CTGGCCGAGG CCTTCTGGCT CATGGAGGGG
TACTTTGTCC GGACCCTGGG GATGCACCGG GTCTACAACA GCGCCTTCAT GAACATGCTC
AAGATGGAGG AGAACGCCAA GTACCGCCAG ACCATCAAGA ACGTGCTGGA GTTCAATCAC
GAGATCCTCA AGCGCTTCGT CAACTTCATG AACAACCCCG ACGAAAAGAC CGCTGTGGAG
CAGTTTGGTA AGGAAAGCAA ATACTTCGGC GCGGCGGTGC TCCTGGTGAC CATGCCCGGG
CTCCCCATGC TGGGCCACGG CCAGGTGGAA GGGTTCCACG AGAAATACGG CATGGAGTAC
AGGCGGGCCT ACTGGGACGA GCCAGTGGAC GAACACCTGG TGGCGGAGCA TGAACGGCGC
ATCTTTCCCC TCATGCGGCG TCGGCGCCTC TTCTCGGGCT CGGAGAATTT CGTCCTCTAC
GACTTCTTCG TGGATGGAGC CGTGAACGAG GATGTCTTCG CCTACTCCAA CCGCCGTGGC
GACGACCGGG GGCTCGTCCT CTACCATAAT CGCTTCGCCA CTACCGCCGG GTGGATCAGG
AGCTCCACGT CCCGTCTCGT GCGGATCGAC TCGGGGGAGA CCGTACTGCG GCAGACCGAC
CTGGGGGCGG CCCTCGGGGT GAACGCCGAT GGCCGCCACT ACTACGTCTT CAGGGATTAC
GCCACCGGTC TGGAGTACAT CCGCCATGGC AGGGAGATTG CCGAGAAGGG GTTGTTCGTG
GAGCTGGAAG CCTACGAGTA CCACGCCTTC CTCGATTTCC GCGAGATCCG CGACGACGAC
TACGGCACCT GGGGCAAGCT TTGCTTCGGG CTTGAGGGGC GAGGGGTACC GAGCATCGAC
GAGGAGGTGC AGCTTATCCG TTACGCATCC CTGGTGGAAC GGTTCCGGGG ACTCTCTCCC
TTTGCTGGGG GAAAAGCAGC GCCGAAGACG TCTTTGGAAC GTTCGAAAGC GTTTCAGGCG
GCCCTTGCGG CGTTTCTTAA GGAACTCGCT TCGGTTGCCG GCGTTGACGG CGATCGTGCC
GCGACGGCCG GCGCCGTGAC GGAGCGCCTC GATCGCCTCC CCGGCCTCTG GAAGTCTCTG
GAAAAAGGAG AGCCTGCGAC AGAACTGCCG CTCTTTCCGG CAGACCTCAC CGCGCGATGG
CTTTGTGCGA TGCTCCTTGT CCTCCATGAG ACCGGTCGGC TTGGTGGCGA CGACGCGGAG
TATCCTGCCC GCTCTGTCCA ATGGTTTGGC ACCTTCGGCC TCAGGCGTGC CCTGGCGGAC
CTCATCCACG AGGCCGTCGA GGAAGGGGAC GAATCCCCCC ACGGGGACCC TGACCGTCTA
GCCCTTTTGG CGGATATCGT CGTGGTCTAT CCCAGCCTTG GCGGGCTTCT CGGAAGTTCT
GGGCGTTCCG GAGCCCTCCA GCGCCTTATG GACGACCGTC GGGTCAGGCG GTTCATCGGC
GTGAACCGCA GCGGCGTCGT CGAGTGGTTT GTCAAAGAAC CGTTCGAGGA ACTCCTTTCC
TGGCTCGTTC TTTTTGCTGC GGTGACACAA CCTCCCGTTG GAAGAGCGCT CAGTGGATTT
GGTACAGAAC TGGCGGAACT AATGGGAGTG CGTGCGTCGC TGATGGCTCT GGCAGAAGAG
GCCGGTTACC GGGTTAAAGC TTTCCTTGCC CTTGTGACCC CATCTTCCGG CAGACCGGAA
GAGGAATCAC GGCAGGGCAT CCTACGGACC ACTGCGGCGA CCCGGGAGGA AGAGTGGTCA
GGGTGA
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| Protein sequence | MTITSNSTYF PFNLQVAARF WRALDLAPSA RELERLGRPP ILFCRELAAR LNRLPERAGR
PVQGGVLNLY SLQGAIFRHL ITRYAQGQAP GVLEKSLADA GFPLDSPQLT ALLERFATLF
PPAALLYGDA ESPAAWLAAG GTSQRLQAVE ELLLLSLAAE NSALDSFREL VDDTELAATA
PYRAAVTGLE RALADALPVA GFGVSLTELL RAPLRAAPES LAGQLAYMRD AWSPLLPDEL
LAQLEVAFGI VEEETRPFWS GGGGAPAPVL EFGPGAGFPA PDDHYPEPEQ FSADVDWMPN
VVLMAKMVYV WLGQLSGWYG KDIHRLDQIP DEELDKLARW GVTGLWLIGI WERSPASQTI
KRMCGNPEAI ASAYSLYDYT IAHDLGGWEA LADLRERALK RGIRLASDMV PNHTGIYSKW
IVEHPDWFVQ LDYPPYPTYR FTGPDLSSSP EVSIHIEDGY WDKSDAAVVF KHYDHRNGRT
RYIYHGNDGT STPWNDTAQL DYLNPEVREA VTRTILHVAH NFPIIRFDAA MTLAKKHYQR
LWFPQPGLGS GVPSRAERGL TRAVFDAAMP EEFWRQVVDR AAAETPDTLL LAEAFWLMEG
YFVRTLGMHR VYNSAFMNML KMEENAKYRQ TIKNVLEFNH EILKRFVNFM NNPDEKTAVE
QFGKESKYFG AAVLLVTMPG LPMLGHGQVE GFHEKYGMEY RRAYWDEPVD EHLVAEHERR
IFPLMRRRRL FSGSENFVLY DFFVDGAVNE DVFAYSNRRG DDRGLVLYHN RFATTAGWIR
SSTSRLVRID SGETVLRQTD LGAALGVNAD GRHYYVFRDY ATGLEYIRHG REIAEKGLFV
ELEAYEYHAF LDFREIRDDD YGTWGKLCFG LEGRGVPSID EEVQLIRYAS LVERFRGLSP
FAGGKAAPKT SLERSKAFQA ALAAFLKELA SVAGVDGDRA ATAGAVTERL DRLPGLWKSL
EKGEPATELP LFPADLTARW LCAMLLVLHE TGRLGGDDAE YPARSVQWFG TFGLRRALAD
LIHEAVEEGD ESPHGDPDRL ALLADIVVVY PSLGGLLGSS GRSGALQRLM DDRRVRRFIG
VNRSGVVEWF VKEPFEELLS WLVLFAAVTQ PPVGRALSGF GTELAELMGV RASLMALAEE
AGYRVKAFLA LVTPSSGRPE EESRQGILRT TAATREEEWS G
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