Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2900 |
Symbol | |
ID | 3740850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3282926 |
End bp | 3283780 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637780191 |
Product | cytochrome c assembly protein |
Protein accession | YP_385843 |
Protein GI | 78224096 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000000276179 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.563922 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCAGTT CCATGCTGTT CAATATCGCA ACTTTTTCCT ATCTGATTTC CATGCTCGCC TTCTTCACCT TCCTGGCGGT GAAGGGGAAG TCCGTGGGAC TTGTCGGAAG TCTGGCGGCA TACTTTGGCT TCATCGTCCA CTCCGCCGCG ATTCTGCTTC GCTGGAAGGA GTCCTATGAC ATCGGGATGG GCCATGCCCC CCTCTCGAAC CTCTACGAGT CGGTCGTCTT TTTCGCCTGG ACCATCATCC TTATCTTCGG AATCATTGAT CTCAAGTACA AATACCGGGT CGTGGGCGCC TTCGTGGTTC CCTTTGCTCT TCTCGGTATG GCCTGGGCCC AGTTGGGGAT GGACAGCGGC ATCCAGCCGC TGGTGCCGGC GCTGCAGAGC AACTGGCTCC TCTACCACGT CATTACCTGC TTCCTGGGGT ATGCCGCTTT CGCGGTGGCC TGCGGCATCT CTATCATGTA CCTGATCAAG GCGGGCAAGG ATGAGTCGGC GGGGAGCGCC CAGTCCGGCG GAATAATCGC CATGTTTCCC TCCATCAAGA TTCTCGATGA CCTTAACTAT AAGGCGATCA TCATCGGCTT TCCGCTCCTT ACTCTCGGCA TCATAACCGG CGCCGCCTGG GCCAACTACG CCTGGGGTAC CTACTGGAGC TGGGACCCGA AGGAAACCTG GTCCCTCATC GTCTGGTTCA TCTACGCTGC TTTCCTCCAT GCCCGCTTCA CCCGCGGGTG GGTCGGCAAG AAGGCGGCCA TCCTTTCCAT TGTCGGATTT GCCGCAACAA TTTTCTGCTA TCTCGGGGTT AACCTTTTCC TTTCCGGGCT CCACAGCTAC GGTGGAGGAG GGTAG
|
Protein sequence | MTSSMLFNIA TFSYLISMLA FFTFLAVKGK SVGLVGSLAA YFGFIVHSAA ILLRWKESYD IGMGHAPLSN LYESVVFFAW TIILIFGIID LKYKYRVVGA FVVPFALLGM AWAQLGMDSG IQPLVPALQS NWLLYHVITC FLGYAAFAVA CGISIMYLIK AGKDESAGSA QSGGIIAMFP SIKILDDLNY KAIIIGFPLL TLGIITGAAW ANYAWGTYWS WDPKETWSLI VWFIYAAFLH ARFTRGWVGK KAAILSIVGF AATIFCYLGV NLFLSGLHSY GGGG
|
| |