Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2717 |
Symbol | |
ID | 3740024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3068824 |
End bp | 3070629 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637780002 |
Product | ATP-dependent DNA helicase RecQ |
Protein accession | YP_385660 |
Protein GI | 78223913 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0514] Superfamily II DNA helicase |
TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family [TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCGCCA ACAATCCCCT CGACACCCTC CGGACGGTCT TCGGCTACCG CACCTTCCGC CCCTTCCAGG AGGAGATCGT CACCCGTCTC ATCGGCGGCG GCGATGCCTT TGTCCTCATG CCGACGGGGG GCGGAAAGTC CCTCTGCTAC CAGATTCCGG CCATCCACCG TCCCGGCGTC GGCATCGTGG TCTCTCCCCT CATCTCCCTC ATGAAGGACC AGGTGGATAC GCTGCGGGAG AACGGCGTGG CGGCCGCGGC CTACAATTCC GCCATGGGCG AGCGGGAGGC CCGGCAGGTC CTGGCCCGGC TCCACGCGGG CGAGCTGGAT CTCCTCTACG TGGCGCCGGA GCGGCTCATG ACCGACGCCT TTCTGGAGCG GCTCCGGGAG ATCCCCGTGG CCCTTTTCGC CATCGACGAG GCCCACTGCG TTTCCCAGTG GGGGCACGAC TTCCGCCCCG AGTACGTGGG GCTGGGGCGG CTGCGGGGGC TCTTCCCCGG CGTGCCGGTC ATCGCCCTCA CCGCCACCGC CGACGTCCAG ACCCGCAGCG ACATCATCGA CCGGCTGGGG CTTCGGGACG CCCAGGTCTA CGTCACCGGC TTCGACCGGC CGAACATCCG GTACACCGTG GTCGATAAGC AGAAGCCCTT TCACCAGCTC CTGGCGTTTC TGGGGAACCG CCCTCAGGAT GCCGGCATCG TCTACGCCCT CTCCAGAAAG CGGGTGGAGG AGGTGGCCGG CAAGCTGCGG GATGCCGGCA TCGAGGCGGC CGCCTACCAT GCGGGGCTGG CCGACGGCGA GCGGGGCCGG GTCCAGGAGG CGTTCCTGCG GGATGATGTC CGCGTTGTGG TGGCCACCGT CGCCTTCGGC ATGGGGATCG ACAAGCCCAA CGTCCGGTTC GTGGTCCACT ACGACCTTCC CAAGAACATC GAGAGCTACT ACCAGGAGAC GGGCCGGGCC GGGCGCGACG GGCTGCCGGC CGAGGCGCTC CTTCTCTTCG GCTATGGAGA TATTGCCGTC TCCCGCTCCC TCATCGAGTC CGGCAACAAT CCGGAACAGG TGCGGATCGA GCTCCACAAG CTGAACGCCA TGGTGGGGTT CGCCGAGGCC GGCACCTGCC GCCGGGAGGC GCTCCTGGGC TATTTCGGCG AGCGGCTTGC CGAGCCGTGC GGCAACTGCG ATCTCTGTCT CGATCCCCCC GAGAGCTTCG ACGCCACCGA GGATGCCCGC AAGGCCCTCT CCTGCGTCTA CCGGGTGGGG CAGCGCTTCG GCATGGGGCA TGTGATCGAC GTGCTGCGGG GCTCGAAAAA CGAGCGGATC CAGCAGCTGG GCCACGATCG CCTCTCCACC TACGGCATCG GCGCGGACCG CTCCGCCGAG GCGTGGGGAA GCATCATCCG CCAGCTTATT CATCGCGGGT ACCTGGAGCA GGACCTGGCC AACTATTCGG TGCTGAAGCT GACCCCGGCG GCCCGTCCCC TGTTGCGGGG GGAGGTGAGC CTGACCCTTG CGAAGCCCCG GGTGAAGGTT GCCCCGGTCA AAAAGGAGCC GAAGCGTAAG GGGGTAGTGG CATCGCTGGC CGAGAGGGAC GAGGATCTCT TCCAGGCGCT GAGGGCTCTC CGCAAGCGAC TGGCCGACGA GCAGCAGGTC CCCCCCTATG TCATCTTCAG CGACGCCACG CTGGTCGAGA TGGCGACCCT GCGTCCCGCA ACCATGGACG ACCTCCTGCG GGTGAACGGG GTAGGGGAGC AGAAGCTCGG GCGCTACGGC GCGGCGTTTC TTGAGGCGAT TCGGAACAAT TCGTGA
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Protein sequence | MIANNPLDTL RTVFGYRTFR PFQEEIVTRL IGGGDAFVLM PTGGGKSLCY QIPAIHRPGV GIVVSPLISL MKDQVDTLRE NGVAAAAYNS AMGEREARQV LARLHAGELD LLYVAPERLM TDAFLERLRE IPVALFAIDE AHCVSQWGHD FRPEYVGLGR LRGLFPGVPV IALTATADVQ TRSDIIDRLG LRDAQVYVTG FDRPNIRYTV VDKQKPFHQL LAFLGNRPQD AGIVYALSRK RVEEVAGKLR DAGIEAAAYH AGLADGERGR VQEAFLRDDV RVVVATVAFG MGIDKPNVRF VVHYDLPKNI ESYYQETGRA GRDGLPAEAL LLFGYGDIAV SRSLIESGNN PEQVRIELHK LNAMVGFAEA GTCRREALLG YFGERLAEPC GNCDLCLDPP ESFDATEDAR KALSCVYRVG QRFGMGHVID VLRGSKNERI QQLGHDRLST YGIGADRSAE AWGSIIRQLI HRGYLEQDLA NYSVLKLTPA ARPLLRGEVS LTLAKPRVKV APVKKEPKRK GVVASLAERD EDLFQALRAL RKRLADEQQV PPYVIFSDAT LVEMATLRPA TMDDLLRVNG VGEQKLGRYG AAFLEAIRNN S
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