Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2612 |
Symbol | |
ID | 3739997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2959324 |
End bp | 2959884 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637779898 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_385556 |
Protein GI | 78223809 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGAATCA AGGAGGAGCG GCTGGACTCC ACTGAGATAT TAAACCGATT TCTGGCGGGG ATTGAGCGAC GGGCCTTCCG CATGGCTCGA CTTGCCACAT CGGACGATGA CGAGGCCCTC GACTTGGTGC ATGATGCCAT GCTTGCCTTC GTGAACCGCT ATGCCGGCAA GCCCGAGGGG GAGTGGGCGC CGCTGTTCCA CCGGACCCTC CAGAACCGCA TCGTTGACTG GCACCGCCGC ACGGGGGTCA GGAACCGTTT CCGTGCATGG TTTTTGGGGG GAGAGAGCGA GGAGGAGAGT GATCCCCTGG AAAACGTGGC TGATCTCTCC TCTCCCGATC CTTTGGCGAG CCTCCAGCGG CACGATTTGG GCGAAGCCAT CGAGTCGGCG GTCCGCCGGC TTCCTCTCCG GCAGCGGCAG GCCTTCCTTC TGCGGGCCTG GGAAGGGCTT GACACGGCCC AGACGGCCTT TGCCATGGGA TGTTCGGAGG GAAGCGTGAA GACCCATTAT TCGCGCGCGG TCCATACGTT GCGCGACTAT CTTGAGGAGT ACGCACCATG A
|
Protein sequence | MRIKEERLDS TEILNRFLAG IERRAFRMAR LATSDDDEAL DLVHDAMLAF VNRYAGKPEG EWAPLFHRTL QNRIVDWHRR TGVRNRFRAW FLGGESEEES DPLENVADLS SPDPLASLQR HDLGEAIESA VRRLPLRQRQ AFLLRAWEGL DTAQTAFAMG CSEGSVKTHY SRAVHTLRDY LEEYAP
|
| |