Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2580 |
Symbol | |
ID | 3739930 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 2926792 |
End bp | 2932470 |
Gene Length | 5679 bp |
Protein Length | 1892 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637779866 |
Product | UvrA family protein |
Protein accession | YP_385524 |
Protein GI | 78223777 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0178] Excinuclease ATPase subunit |
TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.603689 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 62 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCACG AATCGATTTC CATCCGCAAC GCCCGCCAGA ACAACCTCAA AAATCTCGAT CTCGACCTTC CCCTCGGCGA ACTGATCGTC GTCACCGGCG TCTCCGGGTC GGGGAAGTCG TCCCTGGCCT TCGACACGGT CTATGCCGAG GGGCAGCGCC GCTACGTGGA GACCTTCTCC CCCTACGCCC GCCAGTTCCT GGACCGGATG GACCGCCCGG CGGTGGACCG GATCGACGGG ATCCCCCCGG CCATCGCCAT TGACCAAACC AACCCGGTCC GCACCTCCCG CTCCACCGTG GGGACCATGA CGGAGCTGAA CGACCACCTG AAGCTCCTCT TCGCCCGGGG GGCGCGGCTC TTCTGCCGCG GCTGCGGCCG GCCGGTGCGG CGCGACACGC CGGAGAGCAT TGTTGATGAG CTGCTGGCGC GAAACCCTCA CCCGGCCTCC GGCCACCCTC TCCCCAAGGG CGAGGGTAAC GATCTCTCCC TCTCCCCCTC TGTCCTCGTC ACCTTCCCGG TACCGGTGCC GGCCAACTTC TCCGCCGACG AGGTGAAGGG GTTCCTGGCC GGCCAGGGGT ACACCCGCAT CCACCGGGAG GAGGACGGCA TCCTGGAGGT GATCCAGGAT CGGACGCGCC TGGCCCCGGA GAACCGCTCG CGGCTGGTGG AGGGTATGGA GGCGGCGCTG CGGGTCGGCC ACGGGAGGGT GCTCGTTTAC CCCTTGGGCG GCGACGGTAC ACCGGGGGAG CCGCGGCGGT TCTCTAGTGA TCTCCACTGC CCTGACTGCG ACATCTCGTA CCACGATCCG GCGCCCCACC TTTTCTCCTT CAACTCGCCG GTGGGGGCCT GCGCCACCTG CCGGGGGTTC GGCCGGGTGA TCGGCATCGA CCACGGCCTG GTGATCCCTG ACGAGTCTAG GACCCTGGCC GGCGGCGCGG TGAAGCCGTG GCAGACCGAG AGCTACCGGG AATGCCAGGA CGACATGATG ACCTTCGCCG CCAAGCGGGG CGTCCCCGTC AATGTGCCGT GGCGTGAGCT GACGGAGGAA CAGCGCCACT GGGTGCTTGA GGGGGAGGGC TCGTGGGATG AGGGGCTCTG GTACGGGGTG CGGCGCTTCT TCGACTGGCT CGAAACCAAG AGCTACAAGA TGCATATCCG GGTACTCCTC TCCAAATACC GCGCCTACAC CCTCTGTCCC GCCTGCCGGG GGGCGCGGCT GAGCCCCGAT GCGCTCCTCT GGCGACTCGG GACCAGAGAG GAGGCCGACA AGGTGCTTTC CCCGGAACTC CGCTTTCGCC CCGAGGGGAT GGAGCTGTCC GATGAGATTC TGCGTAATCT GCCCGGCCTC ACCATCCACG ATGTCATGCT CCTCCCCCTG GACCGCTGCG CGGAGTTCTT CGGCGCCCTG GCGCTGCCGC CCCCCCTGGA CGAGGCGGCG GAGCTGCTCC TGCGGGAGAT CCGCGCCCGC CTCGGCTACC TGGGGACGGT GGGGCTCGGC TACCTGACCC TGGACCGCCA GTCCCGGACC CTCTCCGGCG GCGAGGTGCA GCGGATCAAC CTGACCACGG CCTTGGGGAC CTCCCTCGTC AACACCCTCT TCGTGCTGGA CGAGCCCTCC ATCGGCCTCC ACCCCCGGGA CATGGGGCGG GTGATCGGAG TCTTGCGGCA GCTGCGGGAC GCCGGGAACA CGCTGCTGGT GGTGGAGCAC GACCCCCAGG TGATGCTCGC CGCCGACCGG CTGTTGGACA TGGGCCCGGG GCCGGGGGAG CGGGGAGGGG AGGTGGTCTT CTTCGGGACG CCGGGGGCGA TTCTGGGGGA GAAGCGGTCG TTGACGGGGG AGTATCTGGC GGGGCGGCGG CGGATCGCCC CTCACCTGGC CTTCGGCCAC CCTCTCCCGG AGGGCGAGGG TTATGGAAAC CCCCTCTCCC TCCGGGAGAG GGTTGGGGTG AGGGCAGAGG AGAGGGAGAA TGTCGGATAC GTGGAAATCC TCGGCGCCGC CGCCCACAAC CTCACGGGGA TCGACGTCCG CGTCCCCCTC AATCGCCTCG TCTGCATCAC CGGCGTTTCC GGCTCGGGCA AGTCGACCCT GGTCCAGGAT GTGCTCCACC GGGGGCTCCT GAAGCTGAAA GGAAAGCCGA CGGAACTGCC GGGGGCCCAC GCCGCCATTA ACGGGGCGGA GCTGATCGGC GACGTGGTGC TGGTGGACCA GTCCCCCATC GGCAAGACGA CCCGCTCCAA CCCGGCCAGC TACGTGGGGG CCTTCGACGC CATCCGCAAG CTCTTCGCCG CCGAGCCCCT GGCCAAGGAG CGAGGGTACA CCACCGGCAC CTTCAGCTTC AACGCTGGCA CCGGGCGTTG CCCCGCCTGC GGCGGCAACG GCTTCGAGCA TGTGGAGATG CAGTTCCTCT CCGACGTCTA CCTGCGCTGT CCCGACTGCG ACGGCCGCCG CTACCGCCCC GAGGTGCTGG AGGTGCGACT CGTGCCGGCC GGGGACGGGC GCCCCGTCTC CATCGCTGAT GTGCTGGAGA TGACCGTGAC CGAGGCGGTG TCTTTCTTTG CCGGTCACCG GGAGGTGCTC CGGGGTCTCG AACCCCTGGA GGCCGTCGGC CTCGGGTATC TCCGCCTCGG CCAGCCGGTG CCGACCCTTT CCGGCGGCGA GGCCCAACGC CTGAAGCTGG CCGGGCACCT GGCCCAAGTG GGAGGTCGGA AGCGGGTGGA GTCAGGGAAC CTCTTCCTCT TCGACGAGCC CACCACCGGC CTCCACTTCG AGGACATCGC CCGGTTGCTG GCCGCCTTCC GACGGCTCCT TGAGGCCGGC GACTCCCTGG TGGTGATCGA GCACAACCTG GATGTCATCG CCGCCGCCGA CTGGCTCCTG GACCTGGGAC CCGAGGGGGG CGACGGCGGC GGGCGGCTGG TCTGCGCCGG CACCCCGGAC GAGGTGATGG TGTGCGATGA GAGCCACACC GGTCGGGCCC TGCGGGAGTA CGGGGAGGAA CTGGCCGCCC TGGTGAGGGA GTCGACCCGG ACCGTGGCAG AGGCGCCCCC CGCCGTGGTG CCGGACCGCT CCATCCGTAT CGTCCACGCC CGGGAGCACA ACCTGAAGAA CGTCACCATC GCCGTCCCCC GGGACCGCTT CACGGTCATC ACCGGCATCT CGGGGAGCGG CAAGTCCACC GTCGCCTTCG ACATCCTCTT CGCCGAGGGG CAGCGGCGCT ACCTGGAATC CCTCAACGCC TACGCCCGCC AGTTCGTCCA GCCGGCGGCC CGTCCCGACG TGGACGCGGT CCTCGGCATC CCCCCCACGG TGGCCATCGA GCAGCGGACA AGCCGGGGGG GGCGCAAGAG CACCGTGGCG ACCCTGACGG AGATCTACCA CTTCCTCCGG CTCCTCTTCG TGAAGCTCGG GGTGCAGCAC TGCCCCGACT GCAGCATCCC CATCACCCCC CAGACCCCGG ATGCCATCGT GGCCCGGCTC CTGCGTGATT TCCGGGGGAA GCGGGTGGCG CTCCTGGCGC CGCTGGTCAC GGCCCGTAAG GGGTACTACA CCGACTTGGC CAAGTGGGCC GCCGGGAAAG GGTTTACAAG CCTCCGGGTG GATGGCGTCA TGACCCCCGT GGAACCGTGG CCGCGGCTCG ACCGCTTCCG GGAACATGAC ATCGACCTTC CCGTGGGGGA GATCACGGTG GCGGCGAAAG GGGAGGGGGC GCTGCGGGAG CTGCTGGACC GGGCCCTCGC CTTCGGCAAG GGGGTGGTGC GGGTGGCGGT GGCGGGGGGG GAGGAACAGC TCTACTCGAC GCTCCGCGCC TGCACCTCCT GCGGCCAGAG TTTTCCTGAG CCCGACCCGC GGCTCTTCTC CTACAACTCC CGCCATGGCT GGTGCCCCCG CTGCTTCGGC ACGGGGCTGG AGATCCCCGG CTTCGACGCG GAGCAGTCCG GCGAGGAGAT CTGGTGGAAC GAGTGGTTCG AGGGTGAGGA GCGGACCTGC TCCGCCTGCC ACGGCGCCCG CCTCAACCCC GAGGCCCTGG CGGTCCGCTT CCGGGACCGG AACATCGCCG AGTTGACGGC CCTTACCGTG ACCCAGGCGG CTTTCTTTGT GCGCGACCTG GGGCTGGAGG GGCGGGAGGC GGCCATCGCC CGGGATATCG TGGCCGAGAT CACGACGCGG CTCGCCTTCC TGGGCGAGGT GGGGCTCGGC TACCTCGCCC TGGACCGGGC GGCACCCACC CTCTCCGGTG GCGAGGCCCA GCGGATCAGG CTCGCAGCCC AGCTGGGCTC GAACCTGCGG GGGGTCTGCT ACATCCTCGA TGAGCCCACC ATCGGCCTTC ACCCCCGGGA CAACCGGATG CTCCTGGACA CCCTGCGGAA GCTGGAGGGG AAGGGGAACA CCATCGTGGT GGTGGAGCAT GACGAGGAGA CCATCCGCCG GGCTGAGCAC GTCATCGACC TGGGCCCCGG CGCCGGCGTC AACGGCGGTC TGGTGGTGGC CGAGGGAACC CTGGAACAGG TGATGGCGGC CCCGGACTCC CTCACCGGCC GCTACCTGGC GGAGCCCCTG CGTCATCCCC TCGTGGAGCG GCGTCCCGCA CCGACACCGG AGGAGCCGAG TATCCAGGTG TTGGGGGCCA TCCTCCACAA CCTGCAAGGG GTCGACGTCG CCTTCCCGCT CCGGCGGCTC GTCTGCGTCA CCGGCGTCTC GGGGAGCGGC AAGAGCACCC TGGTGCGCAA CGTCCTCCAC TCCTCCATCC AGGGGCTCCT GGCCCACGGC AAGGGAGCCC ATACCGTGGC CGGGTGTCGG GAAATCACAG GGTGGGAGCA GCTCACTCGC GTCCTGGAGG TGGACCAGAC CCCCATCGGC AAGACCCCCC GGTCGTGCCC CGCCACCTAC GTGGGGTTCT GGGACGCCAT CCGGAAACTC TACGCCGGCA CCACCGAGGC GCGGCTCCGG GGGTACGGCC CCTCCCGCTT CTCCTTCAAC GTGAAGGGGG GGCGGTGCGA CGAGTGCGAG GGGCAGGGGG TGAAGACCAT TGAGATGAGC TTCCTCCCCG ACGTGAAGGT GGCGTGCGAG GTCTGCGGGG GCTTGCGCTT CAACGCCGAG ACCCTCATGG TCCGCCACCG GGGGAAATCC ATCGGCGACC TCCTGGCCAT GAGCGTGGAC GAGGCGGTCG GGTTCTTCGC CGCCCACCGG GCCATCCTCC ACCCGCTTCA GCTGCTGCAG GACGTGGGAC TGGGGTATCT GACCCTGGGG CAGCAGAGCC CCACCCTTTC CGGAGGCGAG GCCCAGCGGA TCAAGCTCGT CACCGAGCTG GCCAAGGCGA AGCCGGTGAA GGACGCGCTC CGGGTGCCGC GAAACGCACC CCACTCCCTC TATATCCTGG ACGAGCCCAC CATCGGCCTC CACATGGCCG ACGTGGAGAA ACTGGTCCGG GTCCTCCACC GGCTGGTGGC GGCGGGGAAT TCGGTGGTCG TCATCGAGCA CAACCTGGAC GTCATCGCCG AGGCCGACTG GCTCATGGAC CTGGGGCCCG AGGGGGGGGA CGGCGGCGGG ATGGTTGTTG CCCAGGGAAC GCCGGAGGAG GTGGCCCGTA TGGGCGGCGT TTCCCACACG GGGCGGATAC TTGGGGAGTT CCTGCGGGAG CGGGGATCGG AAGGGGAAGT AAAGCGGACA CGAGAGTGA
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Protein sequence | MSHESISIRN ARQNNLKNLD LDLPLGELIV VTGVSGSGKS SLAFDTVYAE GQRRYVETFS PYARQFLDRM DRPAVDRIDG IPPAIAIDQT NPVRTSRSTV GTMTELNDHL KLLFARGARL FCRGCGRPVR RDTPESIVDE LLARNPHPAS GHPLPKGEGN DLSLSPSVLV TFPVPVPANF SADEVKGFLA GQGYTRIHRE EDGILEVIQD RTRLAPENRS RLVEGMEAAL RVGHGRVLVY PLGGDGTPGE PRRFSSDLHC PDCDISYHDP APHLFSFNSP VGACATCRGF GRVIGIDHGL VIPDESRTLA GGAVKPWQTE SYRECQDDMM TFAAKRGVPV NVPWRELTEE QRHWVLEGEG SWDEGLWYGV RRFFDWLETK SYKMHIRVLL SKYRAYTLCP ACRGARLSPD ALLWRLGTRE EADKVLSPEL RFRPEGMELS DEILRNLPGL TIHDVMLLPL DRCAEFFGAL ALPPPLDEAA ELLLREIRAR LGYLGTVGLG YLTLDRQSRT LSGGEVQRIN LTTALGTSLV NTLFVLDEPS IGLHPRDMGR VIGVLRQLRD AGNTLLVVEH DPQVMLAADR LLDMGPGPGE RGGEVVFFGT PGAILGEKRS LTGEYLAGRR RIAPHLAFGH PLPEGEGYGN PLSLRERVGV RAEERENVGY VEILGAAAHN LTGIDVRVPL NRLVCITGVS GSGKSTLVQD VLHRGLLKLK GKPTELPGAH AAINGAELIG DVVLVDQSPI GKTTRSNPAS YVGAFDAIRK LFAAEPLAKE RGYTTGTFSF NAGTGRCPAC GGNGFEHVEM QFLSDVYLRC PDCDGRRYRP EVLEVRLVPA GDGRPVSIAD VLEMTVTEAV SFFAGHREVL RGLEPLEAVG LGYLRLGQPV PTLSGGEAQR LKLAGHLAQV GGRKRVESGN LFLFDEPTTG LHFEDIARLL AAFRRLLEAG DSLVVIEHNL DVIAAADWLL DLGPEGGDGG GRLVCAGTPD EVMVCDESHT GRALREYGEE LAALVRESTR TVAEAPPAVV PDRSIRIVHA REHNLKNVTI AVPRDRFTVI TGISGSGKST VAFDILFAEG QRRYLESLNA YARQFVQPAA RPDVDAVLGI PPTVAIEQRT SRGGRKSTVA TLTEIYHFLR LLFVKLGVQH CPDCSIPITP QTPDAIVARL LRDFRGKRVA LLAPLVTARK GYYTDLAKWA AGKGFTSLRV DGVMTPVEPW PRLDRFREHD IDLPVGEITV AAKGEGALRE LLDRALAFGK GVVRVAVAGG EEQLYSTLRA CTSCGQSFPE PDPRLFSYNS RHGWCPRCFG TGLEIPGFDA EQSGEEIWWN EWFEGEERTC SACHGARLNP EALAVRFRDR NIAELTALTV TQAAFFVRDL GLEGREAAIA RDIVAEITTR LAFLGEVGLG YLALDRAAPT LSGGEAQRIR LAAQLGSNLR GVCYILDEPT IGLHPRDNRM LLDTLRKLEG KGNTIVVVEH DEETIRRAEH VIDLGPGAGV NGGLVVAEGT LEQVMAAPDS LTGRYLAEPL RHPLVERRPA PTPEEPSIQV LGAILHNLQG VDVAFPLRRL VCVTGVSGSG KSTLVRNVLH SSIQGLLAHG KGAHTVAGCR EITGWEQLTR VLEVDQTPIG KTPRSCPATY VGFWDAIRKL YAGTTEARLR GYGPSRFSFN VKGGRCDECE GQGVKTIEMS FLPDVKVACE VCGGLRFNAE TLMVRHRGKS IGDLLAMSVD EAVGFFAAHR AILHPLQLLQ DVGLGYLTLG QQSPTLSGGE AQRIKLVTEL AKAKPVKDAL RVPRNAPHSL YILDEPTIGL HMADVEKLVR VLHRLVAAGN SVVVIEHNLD VIAEADWLMD LGPEGGDGGG MVVAQGTPEE VARMGGVSHT GRILGEFLRE RGSEGEVKRT RE
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