| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2546 |
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| Symbol | |
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| ID | 3738831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | + |
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| Start bp | 2890391 |
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| End bp | 2892811 |
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| Gene Length | 2421 bp |
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| Protein Length | 806 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637779832 |
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| Product | ribonuclease E |
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| Protein accession | YP_385490 |
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| Protein GI | 78223743 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000147077 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 1.1855699999999999e-20 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAA AGATGCTCAT CAACGTGATG CATCCGGAGG AGGCCCGCGT TGCCATCGTC
GAAGACGGCA AGCTGGACAA TCTGGACATC GAGATCGCGG GGAGCGAACA GACCCGCGGC
AACGTCTACA AGGGGGTCGT GGTCCGGGTG GAGCCGGGGC TCCAGGCGGC CTTCGTGGAT
ATCGGGGCCA AAAGGCTCGG CTTCCTCCAG ATGGGGGAGA TTCACCCCTC CTTCTGGCAG
TGGCGCGACG ACGTCCCCCC CGAGAACCGC AACCGCCGCC CCCGCATCCA GGAAGTGATC
CGCCGGGGCC AGGAACTCAT CGTCCAAGTG GAAAAGGGTG AACGGGACAT GAAGGGGGCG
GCCCTCACCA CGTACATGTC GTTCCCGGGG CGCTACATGG TCCTTATGCC GGGAAGCGAC
TCCGCCGGCA TCTCCCGCAA GGTGGAGAGC GATGCCGACC GCAAGAAACT GAAGGAGAAG
CTCAGCCAGA TGGAGATCCC CGAGGGGATC GGCTATATCG TCCGGACCGA GGCCCTCGGC
AAGACCAAGA CCGAGCTGAA CAAGGACCTC CAGAACCTCC TCACTCTTTA CAAGTCGATC
CAGGAAAAGG CGGCCGCCCT CAAGGCCCCG GCCCTCATCC ACCAGGAGAT GAACGTGGTC
ATCCGGACCA TCCGCGACTA CTTCACCGCC GAGATCGACG AAGTGCTCGT GGACAGCAAG
GAGGTCTACA AGGAGGCCCG GGACTTCTTC AAGCAGACCA TGCCCAAATA CGAGAAACTG
GTGAAGCTCC ACACGGAGAA GCGCCCCATC TTCTCCCGCT ACCAGATTGA GGAGCAGATC
GACCTCATCT ACGAGAAGAA GGTCCCTCTA AAATCCGGCG GCTACCTCAT CATCGAGCCC
ACCGAGGCCC TGGTCTCCAT CGACGTCAAC TCCGGCAAGA CCACCGGGGA GAAGGGGGTG
GAGGATACCG CCTACAAGAC CAATTTGGAG GCGGCGGAAG AGGCGGCCCG GCAACTGCGG
CTGCGGGACC TGGGGGGGCT CATCGTCCTT GATTTCATCG ACATGCGGGA CCGCAAGCAC
AACGCCACCG TGGAGAAGAC TCTCAAGGCC GCCCTCAAGG AGGACAAGGC CCGGGTCGAG
GTGGGGCGCA TCTCTCAGTT CGGCATGCTG GAGATGTCCC GCCAGCGGAT CAAGCAGACC
CTTGAGCAGG GAAGCACCCT CGAATGCCCC CACTGCAGCG GCCGGGGGAA GGTGAAGAGC
GTTGAGAGCA TGGCCCTCTC CTTCCTCCGC AAGGTCCACG CCGCCGCAGC CAAGGGAACC
GTGGCCGAGG TTCATGGCGG CCTCCCCCTG GAGGTGGCCT ACTACCTCCT GAACCGCAAG
AAGCGAGAAC TGGCCCGGAT CGAGGACGAC TACGACATCG TGGTGACGGT CAAGGGGCGG
ACTTCGTTCC TCATGAACGA GCTGGAACTG GAGACGGTCA AGCGGGAAAA GCCGGCTCAC
ATCGAGCATC CGGCCGAAGC GGCGGAGGCG CCGGAAAAGA AGCCGGAAAC CGTCATGGAA
GCCGCCGAGG CCGTGGAACC CGAGGAGACG GCTCTCCAGG AAGGCGGAGA AGGGAAAAAG
CGCAAGCGTC GCCGCAGCCG CAAGAAAGGA AAGGGAGAGG AAACTCCGGC CGTCTCCCTT
GCCGAAGAGC CTTTGCAGGA GGAAGAAGTC GTCGGGGAGC CTGAAGCCGG TGAGGAACCG
GAGGAGATCG AAGAGGGGGT CGAGGCTGCG CCGGGTGAAG AAGCCAAGAA AAAGCGGCGC
AGGAGACGGC GCCGCGGGAA GAAGCCGCGC GCCGGCGAAG CCGGCGAGGT TCCGGCCGCT
GAAGTCACCG CTGAGATTGT GACTCCCGAG CCGGCCGTCG AACCCTCCGC GCCGATTGAT
GCGGAATCCG CAGCGGAAGC AGAGGAACCA GCAGAACCGG CTGCAGAGGA GGCGAAAAAG
AAGCGCCGCC GCCGCAAGCG CCGCAGCGGC AAGCGAGAGG AGGAGGGACT GGCCGCCGAA
GAGGCAGCCA CCCCGCAAGA AACAGCCCCA GTGGCGCCGG AGCCTGCGCC TGCATCGGCT
GTCGAGCCTG CACCGGAAGA GCCGAAGCCG AAGAAGACCC GTGCACCGCG TACCAAAAGG
GCTGCTGTTG CGGCTTCAGA ACCCGCGGAG CCACAGACCG TCGAGGCGGT ATCCGCCGAA
CCGGCACCTA CTGAAGCGGC ACCGGCAAAG CCTGTGCGCA AACGGGCACC CCGCAAGAAA
GCCGTCGCGG AGGAGGAAGC CATCGCCCCT GAGGCGCACG CGCCGGAGCC GACGCCGGAA
GCCGAGGCAC CGAAACGCAA GCGGGCACCG CGCAAGAAGA AGGAAACCCC TGAAGCTCCG
CCTGAGAATG ATACTCCATG A
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| Protein sequence | MAKKMLINVM HPEEARVAIV EDGKLDNLDI EIAGSEQTRG NVYKGVVVRV EPGLQAAFVD
IGAKRLGFLQ MGEIHPSFWQ WRDDVPPENR NRRPRIQEVI RRGQELIVQV EKGERDMKGA
ALTTYMSFPG RYMVLMPGSD SAGISRKVES DADRKKLKEK LSQMEIPEGI GYIVRTEALG
KTKTELNKDL QNLLTLYKSI QEKAAALKAP ALIHQEMNVV IRTIRDYFTA EIDEVLVDSK
EVYKEARDFF KQTMPKYEKL VKLHTEKRPI FSRYQIEEQI DLIYEKKVPL KSGGYLIIEP
TEALVSIDVN SGKTTGEKGV EDTAYKTNLE AAEEAARQLR LRDLGGLIVL DFIDMRDRKH
NATVEKTLKA ALKEDKARVE VGRISQFGML EMSRQRIKQT LEQGSTLECP HCSGRGKVKS
VESMALSFLR KVHAAAAKGT VAEVHGGLPL EVAYYLLNRK KRELARIEDD YDIVVTVKGR
TSFLMNELEL ETVKREKPAH IEHPAEAAEA PEKKPETVME AAEAVEPEET ALQEGGEGKK
RKRRRSRKKG KGEETPAVSL AEEPLQEEEV VGEPEAGEEP EEIEEGVEAA PGEEAKKKRR
RRRRRGKKPR AGEAGEVPAA EVTAEIVTPE PAVEPSAPID AESAAEAEEP AEPAAEEAKK
KRRRRKRRSG KREEEGLAAE EAATPQETAP VAPEPAPASA VEPAPEEPKP KKTRAPRTKR
AAVAASEPAE PQTVEAVSAE PAPTEAAPAK PVRKRAPRKK AVAEEEAIAP EAHAPEPTPE
AEAPKRKRAP RKKKETPEAP PENDTP
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