| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2524 |
|---|
| Symbol | |
|---|
| ID | 3738575 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | + |
|---|
| Start bp | 2867337 |
|---|
| End bp | 2868971 |
|---|
| Gene Length | 1635 bp |
|---|
| Protein Length | 544 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637779812 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_385470 |
|---|
| Protein GI | 78223723 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.107445 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.0506858 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCACC TCTCGAACAT CACCAAACAG CACGGCGCCC AAGTCCTGTT CCGGGACGCC
AGCTTCCAGA TCCTCCCTGG CACCCGCACC GGCCTGGTTG GCCCCAACGG CGCCGGCAAG
ACCACCATCT TCCGGATCAT CACCGGCGAA GAAGAGGTGG ACGCCGGCGA GATGACCTGC
GCGAAGAAGA CGACCGTCGG CTACTTCTCC CAGGACGTGG GGGAGATGGC GGGCCGTTCT
GCCCTGGAGG AGGTCATGGC CGGCTCGGCG GAGACGGTCA GGCTCGCCGC CGAGCTAAAG
GAGATGGAGG CGGCCATGTG CGAGCCCCAA TCCGACGACG AAATGGCGGC GCTCCTGGAG
CGCTACGGCG CGGCCCAGGA GGAGTTCGAG CACCGGGGAG GCTACGACCT CGACACCCGC
GCCCAGACGG TTCTCACCGG CCTCGGCATC GGGCCGGACC GTTTCCATCA CCCGGTGGAG
TCCTTCAGCG GCGGGTGGAA GATGCGGATC GCCCTGGCGA AGATCCTTAC CCTCAAGCCC
GACGTCCTTC TCCTGGACGA GCCCACCAAC CACCTGGACG TGGAGTCCAT TATCTGGCTG
GAGGAGTGGC TGGCCAACGA CTTCGACGGG GCGCTCCTCA TGACGAGCCA CGATCGGGAC
TTCATGAACC GGATCGTGAC CCGCATCATC GAGGTGGCCA ACAGGACGGT CACCACCTAC
GGCGGCAACT ACGATTTCTA CGAGCGGGAG CGGGACATCC GGCGGGAGCA GCTCCTGGCA
AGCCACAAGC GCCAGCAGGA GATGCTTGCC AAGGAGGAGG AATTCATCGC CCGGTTCGCC
GCCCGTGCCT CCCACGCGGC CCAGGTGCAG TCACGGGTGA AGAAGCTGGA GAAGATCGAA
CGGATCGAGA TCCCCGCCGA GGAGCGAATG GTCCGTTTCG AGTTCAGCGA GCCGCCGAGA
AGCGGCGAGG ACGTGGTAGT GATGGAGAAT CTGGGGAAGG TCTGGCAGAC CCCGGACGGG
GGGGAGAAAC CGGTCTTCGG CGGCGTTTCG GGCATCATCC GGCGGCTCAA CAAGATCGCT
GTGGTGGGGG TGAACGGCGC GGGGAAGTCT ACCTTCCTCA AAGTCCTGGC GGGGCAGACC
GAGCCCACGA CCGGCACCGT GACCATCGGG GCCAACGTGG AGCTGGGCTA CTTCAGCCAG
CACGCCATGG AGGTTCTCGA CCCGAAGAAG ACCGTCTTCG AGACCGTGCA GGAGGCCATG
CCCCTGGCGA ACATCGGCGT CATCCGCAAC CTCCTGGCGG CCTTCCTCTT TCAGGGGGAT
ACCGTGGACA AGCGGGTCGA AAACCTCTCC GGCGGGGAGA AGAGCCGGGT GGTGCTGGCA
ACGCTCCTGG CCCGCCCCGT CAACTTCCTC GTTCTGGACG AGCCCACCAA CCACCTGGAC
ATCCGCTCCC GGGAGATCCT CCTGGACGCC CTCCGGAACT TCGCCGGCAC CGTGGTCATC
GTGAGCCACG ACCGCCACTT CCTCCGCTCC CTGGTGGACC GGGTCTTCGA GGTGGATCAC
GGCGAGATGC GGGTCTACGA GGGGGATTAC TCCTATTATC TTCGCAAGAG CCACGAGCTG
CACGGCCTAC CCTGA
|
|---|
| Protein sequence | MIHLSNITKQ HGAQVLFRDA SFQILPGTRT GLVGPNGAGK TTIFRIITGE EEVDAGEMTC
AKKTTVGYFS QDVGEMAGRS ALEEVMAGSA ETVRLAAELK EMEAAMCEPQ SDDEMAALLE
RYGAAQEEFE HRGGYDLDTR AQTVLTGLGI GPDRFHHPVE SFSGGWKMRI ALAKILTLKP
DVLLLDEPTN HLDVESIIWL EEWLANDFDG ALLMTSHDRD FMNRIVTRII EVANRTVTTY
GGNYDFYERE RDIRREQLLA SHKRQQEMLA KEEEFIARFA ARASHAAQVQ SRVKKLEKIE
RIEIPAEERM VRFEFSEPPR SGEDVVVMEN LGKVWQTPDG GEKPVFGGVS GIIRRLNKIA
VVGVNGAGKS TFLKVLAGQT EPTTGTVTIG ANVELGYFSQ HAMEVLDPKK TVFETVQEAM
PLANIGVIRN LLAAFLFQGD TVDKRVENLS GGEKSRVVLA TLLARPVNFL VLDEPTNHLD
IRSREILLDA LRNFAGTVVI VSHDRHFLRS LVDRVFEVDH GEMRVYEGDY SYYLRKSHEL
HGLP
|
|---|
| |